Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Zcchc9Q8R1J3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Zcchc9Q8R1J3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Zcchc9Q8R1J3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.71■□□□□ 0.91
Zcchc9Q8R1J3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zcchc9Q8R1J3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zcchc9Q8R1J3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.71■□□□□ 0.91
Zcchc9Q8R1J3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zcchc9Q8R1J3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Zcchc9Q8R1J3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
Zcchc9Q8R1J3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zcchc9Q8R1J3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.7■□□□□ 0.9
Zcchc9Q8R1J3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Zcchc9Q8R1J3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Zcchc9Q8R1J3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zcchc9Q8R1J3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zcchc9Q8R1J3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zcchc9Q8R1J3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zcchc9Q8R1J3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Zcchc9Q8R1J3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zcchc9Q8R1J3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Zcchc9Q8R1J3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Zcchc9Q8R1J3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zcchc9Q8R1J3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.66■□□□□ 0.9
Zcchc9Q8R1J3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Zcchc9Q8R1J3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Zcchc9Q8R1J3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zcchc9Q8R1J3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.64■□□□□ 0.89
Zcchc9Q8R1J3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.64■□□□□ 0.89
Zcchc9Q8R1J3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zcchc9Q8R1J3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zcchc9Q8R1J3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zcchc9Q8R1J3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zcchc9Q8R1J3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zcchc9Q8R1J3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.63■□□□□ 0.89
Zcchc9Q8R1J3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Zcchc9Q8R1J3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Zcchc9Q8R1J3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zcchc9Q8R1J3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zcchc9Q8R1J3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc9Q8R1J3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc9Q8R1J3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc9Q8R1J3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc9Q8R1J3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc9Q8R1J3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc9Q8R1J3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc9Q8R1J3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Zcchc9Q8R1J3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Zcchc9Q8R1J3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc9Q8R1J3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zcchc9Q8R1J3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zcchc9Q8R1J3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zcchc9Q8R1J3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zcchc9Q8R1J3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zcchc9Q8R1J3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms