Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.34■■□□□ 1.01
Rtn4rl1Q8K0S5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtn4rl1Q8K0S5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4rl1Q8K0S5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4rl1Q8K0S5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4rl1Q8K0S5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.33■■□□□ 1.01
Rtn4rl1Q8K0S5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
Rtn4rl1Q8K0S5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Rtn4rl1Q8K0S5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn4rl1Q8K0S5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn4rl1Q8K0S5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rtn4rl1Q8K0S5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4rl1Q8K0S5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.3■■□□□ 1
Rtn4rl1Q8K0S5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.3■■□□□ 1
Rtn4rl1Q8K0S5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4rl1Q8K0S5 Gm43173-201ENSMUST00000202246 593 ntBASIC21.3■■□□□ 1
Rtn4rl1Q8K0S5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtn4rl1Q8K0S5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rtn4rl1Q8K0S5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.3■■□□□ 1
Rtn4rl1Q8K0S5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.29■■□□□ 1
Rtn4rl1Q8K0S5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4rl1Q8K0S5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4rl1Q8K0S5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtn4rl1Q8K0S5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4rl1Q8K0S5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4rl1Q8K0S5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4rl1Q8K0S5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4rl1Q8K0S5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rtn4rl1Q8K0S5 Gm12251-201ENSMUST00000117893 792 ntBASIC21.27■■□□□ 1
Rtn4rl1Q8K0S5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
Rtn4rl1Q8K0S5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4rl1Q8K0S5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rtn4rl1Q8K0S5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4rl1Q8K0S5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rtn4rl1Q8K0S5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4rl1Q8K0S5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4rl1Q8K0S5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4rl1Q8K0S5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4rl1Q8K0S5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4rl1Q8K0S5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4rl1Q8K0S5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.23■□□□□ 0.99
Rtn4rl1Q8K0S5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rtn4rl1Q8K0S5 Gm5874-201ENSMUST00000096101 508 ntBASIC21.23■□□□□ 0.99
Rtn4rl1Q8K0S5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4rl1Q8K0S5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4rl1Q8K0S5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4rl1Q8K0S5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4rl1Q8K0S5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4rl1Q8K0S5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rtn4rl1Q8K0S5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4rl1Q8K0S5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4rl1Q8K0S5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms