Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc2Q8CG48 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc2Q8CG48 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Smc2Q8CG48 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc2Q8CG48 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc2Q8CG48 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc2Q8CG48 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Smc2Q8CG48 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Smc2Q8CG48 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Smc2Q8CG48 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.76■■□□□ 1.39
Smc2Q8CG48 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Smc2Q8CG48 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.74■■□□□ 1.39
Smc2Q8CG48 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc2Q8CG48 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Gm43566-201ENSMUST00000196851 808 ntBASIC23.73■■□□□ 1.39
Smc2Q8CG48 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc2Q8CG48 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc2Q8CG48 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.72■■□□□ 1.39
Smc2Q8CG48 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Smc2Q8CG48 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.72■■□□□ 1.39
Smc2Q8CG48 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc2Q8CG48 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc2Q8CG48 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
Smc2Q8CG48 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc2Q8CG48 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.71■■□□□ 1.39
Smc2Q8CG48 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc2Q8CG48 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc2Q8CG48 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Smc2Q8CG48 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
Smc2Q8CG48 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.69■■□□□ 1.38
Smc2Q8CG48 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc2Q8CG48 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.69■■□□□ 1.38
Smc2Q8CG48 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Smc2Q8CG48 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc2Q8CG48 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc2Q8CG48 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc2Q8CG48 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc2Q8CG48 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc2Q8CG48 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc2Q8CG48 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc2Q8CG48 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.66■■□□□ 1.38
Smc2Q8CG48 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc2Q8CG48 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc2Q8CG48 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Smc2Q8CG48 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.66■■□□□ 1.38
Smc2Q8CG48 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc2Q8CG48 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.65■■□□□ 1.38
Smc2Q8CG48 Gm13238-201ENSMUST00000117655 780 ntBASIC23.65■■□□□ 1.38
Smc2Q8CG48 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Smc2Q8CG48 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc2Q8CG48 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc2Q8CG48 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Smc2Q8CG48 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.64■■□□□ 1.38
Smc2Q8CG48 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc2Q8CG48 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Smc2Q8CG48 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Smc2Q8CG48 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc2Q8CG48 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc2Q8CG48 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc2Q8CG48 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms