Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb7Q8CDY9 Gm45444-201ENSMUST00000211394 898 ntBASIC20.78■□□□□ 0.92
Pcdhb7Q8CDY9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb7Q8CDY9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb7Q8CDY9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb7Q8CDY9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb7Q8CDY9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb7Q8CDY9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb7Q8CDY9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb7Q8CDY9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdhb7Q8CDY9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb7Q8CDY9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb7Q8CDY9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb7Q8CDY9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb7Q8CDY9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb7Q8CDY9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb7Q8CDY9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb7Q8CDY9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdhb7Q8CDY9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb7Q8CDY9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb7Q8CDY9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb7Q8CDY9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb7Q8CDY9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb7Q8CDY9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.7■□□□□ 0.9
Pcdhb7Q8CDY9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb7Q8CDY9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb7Q8CDY9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb7Q8CDY9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.69■□□□□ 0.9
Pcdhb7Q8CDY9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Gm13238-201ENSMUST00000117655 780 ntBASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Gm43566-201ENSMUST00000196851 808 ntBASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb7Q8CDY9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb7Q8CDY9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb7Q8CDY9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhb7Q8CDY9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb7Q8CDY9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb7Q8CDY9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb7Q8CDY9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb7Q8CDY9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdhb7Q8CDY9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms