Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shisa4Q8CA71 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shisa4Q8CA71 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.51■■□□□ 1.51
Shisa4Q8CA71 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shisa4Q8CA71 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shisa4Q8CA71 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Shisa4Q8CA71 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shisa4Q8CA71 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shisa4Q8CA71 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shisa4Q8CA71 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shisa4Q8CA71 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.49■■□□□ 1.51
Shisa4Q8CA71 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.49■■□□□ 1.51
Shisa4Q8CA71 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.49■■□□□ 1.51
Shisa4Q8CA71 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shisa4Q8CA71 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.48■■□□□ 1.51
Shisa4Q8CA71 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shisa4Q8CA71 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shisa4Q8CA71 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shisa4Q8CA71 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Shisa4Q8CA71 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Shisa4Q8CA71 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shisa4Q8CA71 Gm7417-201ENSMUST00000192950 473 ntBASIC24.47■■□□□ 1.51
Shisa4Q8CA71 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shisa4Q8CA71 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa4Q8CA71 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.45■■□□□ 1.51
Shisa4Q8CA71 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Shisa4Q8CA71 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shisa4Q8CA71 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shisa4Q8CA71 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Shisa4Q8CA71 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Shisa4Q8CA71 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Shisa4Q8CA71 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Shisa4Q8CA71 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shisa4Q8CA71 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shisa4Q8CA71 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shisa4Q8CA71 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Gm22238-201ENSMUST00000175222 88 ntBASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.42■■□□□ 1.5
Shisa4Q8CA71 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Shisa4Q8CA71 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shisa4Q8CA71 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Shisa4Q8CA71 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shisa4Q8CA71 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shisa4Q8CA71 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shisa4Q8CA71 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shisa4Q8CA71 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shisa4Q8CA71 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.4■■□□□ 1.5
Shisa4Q8CA71 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shisa4Q8CA71 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Shisa4Q8CA71 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Shisa4Q8CA71 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.39■■□□□ 1.5
Shisa4Q8CA71 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.39■■□□□ 1.5
Shisa4Q8CA71 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Shisa4Q8CA71 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Shisa4Q8CA71 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Shisa4Q8CA71 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
Shisa4Q8CA71 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Shisa4Q8CA71 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Shisa4Q8CA71 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Shisa4Q8CA71 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shisa4Q8CA71 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.38■■□□□ 1.49
Shisa4Q8CA71 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.38■■□□□ 1.49
Shisa4Q8CA71 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shisa4Q8CA71 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa4Q8CA71 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shisa4Q8CA71 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shisa4Q8CA71 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shisa4Q8CA71 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms