Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtp1Q8C8C1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC24.06■■□□□ 1.44
Rtp1Q8C8C1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rtp1Q8C8C1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rtp1Q8C8C1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rtp1Q8C8C1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rtp1Q8C8C1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rtp1Q8C8C1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Rtp1Q8C8C1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rtp1Q8C8C1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rtp1Q8C8C1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.04■■□□□ 1.44
Rtp1Q8C8C1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.04■■□□□ 1.44
Rtp1Q8C8C1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC24.04■■□□□ 1.44
Rtp1Q8C8C1 Gm10493-201ENSMUST00000097270 612 ntBASIC24.04■■□□□ 1.44
Rtp1Q8C8C1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Gm12251-201ENSMUST00000117893 792 ntBASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Gm37179-201ENSMUST00000194862 823 ntBASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtp1Q8C8C1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtp1Q8C8C1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtp1Q8C8C1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.02■■□□□ 1.44
Rtp1Q8C8C1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.02■■□□□ 1.44
Rtp1Q8C8C1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtp1Q8C8C1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtp1Q8C8C1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtp1Q8C8C1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rtp1Q8C8C1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtp1Q8C8C1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rtp1Q8C8C1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rtp1Q8C8C1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24■■□□□ 1.43
Rtp1Q8C8C1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rtp1Q8C8C1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rtp1Q8C8C1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24■■□□□ 1.43
Rtp1Q8C8C1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Gm10849-201ENSMUST00000100397 618 ntBASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtp1Q8C8C1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.98■■□□□ 1.43
Rtp1Q8C8C1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtp1Q8C8C1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rtp1Q8C8C1 Gm42642-201ENSMUST00000200683 355 ntBASIC23.98■■□□□ 1.43
Rtp1Q8C8C1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Rtp1Q8C8C1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtp1Q8C8C1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.97■■□□□ 1.43
Rtp1Q8C8C1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rtp1Q8C8C1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rtp1Q8C8C1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.97■■□□□ 1.43
Rtp1Q8C8C1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rtp1Q8C8C1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.97■■□□□ 1.43
Rtp1Q8C8C1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rtp1Q8C8C1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtp1Q8C8C1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rtp1Q8C8C1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rtp1Q8C8C1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtp1Q8C8C1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Rtp1Q8C8C1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtp1Q8C8C1 Gm26833-201ENSMUST00000180899 440 ntBASIC23.95■■□□□ 1.42
Rtp1Q8C8C1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Rtp1Q8C8C1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Rtp1Q8C8C1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
Rtp1Q8C8C1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtp1Q8C8C1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtp1Q8C8C1 Gm43060-201ENSMUST00000200621 289 ntBASIC23.93■■□□□ 1.42
Rtp1Q8C8C1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.93■■□□□ 1.42
Rtp1Q8C8C1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms