Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx6Q8C7R7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx6Q8C7R7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx6Q8C7R7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx6Q8C7R7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rfx6Q8C7R7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Rfx6Q8C7R7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.03■□□□□ 0.96
Rfx6Q8C7R7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx6Q8C7R7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.03■□□□□ 0.96
Rfx6Q8C7R7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.02■□□□□ 0.96
Rfx6Q8C7R7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx6Q8C7R7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx6Q8C7R7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx6Q8C7R7 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.01■□□□□ 0.95
Rfx6Q8C7R7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.01■□□□□ 0.95
Rfx6Q8C7R7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx6Q8C7R7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx6Q8C7R7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx6Q8C7R7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx6Q8C7R7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx6Q8C7R7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx6Q8C7R7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx6Q8C7R7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Rfx6Q8C7R7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx6Q8C7R7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx6Q8C7R7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rfx6Q8C7R7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx6Q8C7R7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx6Q8C7R7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.96■□□□□ 0.95
Rfx6Q8C7R7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx6Q8C7R7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rfx6Q8C7R7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx6Q8C7R7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx6Q8C7R7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx6Q8C7R7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms