Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lin9Q8C735 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Lin9Q8C735 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lin9Q8C735 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Lin9Q8C735 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lin9Q8C735 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Lin9Q8C735 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lin9Q8C735 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Lin9Q8C735 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.67■■□□□ 1.22
Lin9Q8C735 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Lin9Q8C735 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.67■■□□□ 1.22
Lin9Q8C735 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lin9Q8C735 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lin9Q8C735 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.67■■□□□ 1.22
Lin9Q8C735 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Lin9Q8C735 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Lin9Q8C735 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Lin9Q8C735 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lin9Q8C735 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lin9Q8C735 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.66■■□□□ 1.22
Lin9Q8C735 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lin9Q8C735 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.66■■□□□ 1.22
Lin9Q8C735 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.66■■□□□ 1.22
Lin9Q8C735 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Lin9Q8C735 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lin9Q8C735 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lin9Q8C735 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lin9Q8C735 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lin9Q8C735 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lin9Q8C735 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.65■■□□□ 1.22
Lin9Q8C735 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.65■■□□□ 1.22
Lin9Q8C735 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lin9Q8C735 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lin9Q8C735 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Lin9Q8C735 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lin9Q8C735 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lin9Q8C735 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lin9Q8C735 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lin9Q8C735 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lin9Q8C735 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lin9Q8C735 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Lin9Q8C735 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Lin9Q8C735 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lin9Q8C735 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lin9Q8C735 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Lin9Q8C735 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lin9Q8C735 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.63■■□□□ 1.21
Lin9Q8C735 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.63■■□□□ 1.21
Lin9Q8C735 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lin9Q8C735 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lin9Q8C735 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lin9Q8C735 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lin9Q8C735 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lin9Q8C735 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lin9Q8C735 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Lin9Q8C735 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lin9Q8C735 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lin9Q8C735 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Lin9Q8C735 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lin9Q8C735 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lin9Q8C735 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.61■■□□□ 1.21
Lin9Q8C735 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.61■■□□□ 1.21
Lin9Q8C735 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Lin9Q8C735 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lin9Q8C735 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lin9Q8C735 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.6■■□□□ 1.21
Lin9Q8C735 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.6■■□□□ 1.21
Lin9Q8C735 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lin9Q8C735 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lin9Q8C735 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.6■■□□□ 1.21
Lin9Q8C735 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lin9Q8C735 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Lin9Q8C735 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Lin9Q8C735 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Lin9Q8C735 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Lin9Q8C735 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.59■■□□□ 1.21
Lin9Q8C735 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lin9Q8C735 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.59■■□□□ 1.21
Lin9Q8C735 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.59■■□□□ 1.21
Lin9Q8C735 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lin9Q8C735 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Lin9Q8C735 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Lin9Q8C735 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Lin9Q8C735 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lin9Q8C735 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Lin9Q8C735 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lin9Q8C735 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
Lin9Q8C735 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.58■■□□□ 1.2
Lin9Q8C735 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Lin9Q8C735 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Lin9Q8C735 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lin9Q8C735 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.57■■□□□ 1.2
Lin9Q8C735 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms