Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne1Q8C166 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.42■□□□□ 0.7
Cpne1Q8C166 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Cpne1Q8C166 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Cpne1Q8C166 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne1Q8C166 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne1Q8C166 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.41■□□□□ 0.7
Cpne1Q8C166 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne1Q8C166 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne1Q8C166 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne1Q8C166 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne1Q8C166 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne1Q8C166 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cpne1Q8C166 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne1Q8C166 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne1Q8C166 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.39■□□□□ 0.69
Cpne1Q8C166 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne1Q8C166 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.39■□□□□ 0.69
Cpne1Q8C166 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne1Q8C166 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cpne1Q8C166 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne1Q8C166 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne1Q8C166 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpne1Q8C166 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne1Q8C166 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.37■□□□□ 0.69
Cpne1Q8C166 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.37■□□□□ 0.69
Cpne1Q8C166 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.37■□□□□ 0.69
Cpne1Q8C166 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.37■□□□□ 0.69
Cpne1Q8C166 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cpne1Q8C166 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne1Q8C166 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cpne1Q8C166 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne1Q8C166 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpne1Q8C166 Gm10399-202ENSMUST00000202768 748 ntBASIC19.36■□□□□ 0.69
Cpne1Q8C166 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.36■□□□□ 0.69
Cpne1Q8C166 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne1Q8C166 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne1Q8C166 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne1Q8C166 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.34■□□□□ 0.69
Cpne1Q8C166 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne1Q8C166 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne1Q8C166 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne1Q8C166 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.33■□□□□ 0.68
Cpne1Q8C166 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cpne1Q8C166 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne1Q8C166 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne1Q8C166 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.32■□□□□ 0.68
Cpne1Q8C166 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.32■□□□□ 0.68
Cpne1Q8C166 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cpne1Q8C166 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.32■□□□□ 0.68
Cpne1Q8C166 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne1Q8C166 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne1Q8C166 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.31■□□□□ 0.68
Cpne1Q8C166 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne1Q8C166 Gm9959-201ENSMUST00000068277 390 ntBASIC19.31■□□□□ 0.68
Cpne1Q8C166 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne1Q8C166 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne1Q8C166 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne1Q8C166 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms