Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfsfm13Q8BXS2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.48■□□□□ 0.55
Tnfsfm13Q8BXS2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tnfsfm13Q8BXS2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfsfm13Q8BXS2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tnfsfm13Q8BXS2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tnfsfm13Q8BXS2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfsfm13Q8BXS2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfsfm13Q8BXS2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfsfm13Q8BXS2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfsfm13Q8BXS2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfsfm13Q8BXS2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfsfm13Q8BXS2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfsfm13Q8BXS2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.43■□□□□ 0.54
Tnfsfm13Q8BXS2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tnfsfm13Q8BXS2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tnfsfm13Q8BXS2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.43■□□□□ 0.54
Tnfsfm13Q8BXS2 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.43■□□□□ 0.54
Tnfsfm13Q8BXS2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfsfm13Q8BXS2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfsfm13Q8BXS2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfsfm13Q8BXS2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tnfsfm13Q8BXS2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsfm13Q8BXS2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm45444-201ENSMUST00000211394 898 ntBASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms