Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3dQ8BX13 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3dQ8BX13 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3dQ8BX13 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3dQ8BX13 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3dQ8BX13 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3dQ8BX13 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3dQ8BX13 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3dQ8BX13 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3dQ8BX13 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.36■□□□□ 0.53
Ube3dQ8BX13 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3dQ8BX13 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube3dQ8BX13 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ube3dQ8BX13 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube3dQ8BX13 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube3dQ8BX13 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube3dQ8BX13 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ube3dQ8BX13 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Etf1-202ENSMUST00000180351 108 ntBASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube3dQ8BX13 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube3dQ8BX13 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.31■□□□□ 0.52
Ube3dQ8BX13 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3dQ8BX13 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ube3dQ8BX13 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms