Protein–RNA interactions for Protein: Q8BMQ2

Gtf3c4, General transcription factor 3C polypeptide 4, mousemouse

Known RBP Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4Q8BMQ2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c4Q8BMQ2 Gm10232-201ENSMUST00000089221 720 ntBASIC21.29■■□□□ 1
Gtf3c4Q8BMQ2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c4Q8BMQ2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c4Q8BMQ2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c4Q8BMQ2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c4Q8BMQ2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c4Q8BMQ2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.28■■□□□ 1
Gtf3c4Q8BMQ2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c4Q8BMQ2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gtf3c4Q8BMQ2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Gtf3c4Q8BMQ2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.27■■□□□ 1
Gtf3c4Q8BMQ2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c4Q8BMQ2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c4Q8BMQ2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c4Q8BMQ2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c4Q8BMQ2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.24■□□□□ 0.99
Gtf3c4Q8BMQ2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c4Q8BMQ2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c4Q8BMQ2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c4Q8BMQ2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c4Q8BMQ2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gtf3c4Q8BMQ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gtf3c4Q8BMQ2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Gtf3c4Q8BMQ2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c4Q8BMQ2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Gm15039-201ENSMUST00000118914 875 ntBASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c4Q8BMQ2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c4Q8BMQ2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c4Q8BMQ2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c4Q8BMQ2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c4Q8BMQ2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c4Q8BMQ2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c4Q8BMQ2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c4Q8BMQ2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c4Q8BMQ2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c4Q8BMQ2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Gtf3c4Q8BMQ2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c4Q8BMQ2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c4Q8BMQ2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c4Q8BMQ2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms