Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf38Q8BI21 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf38Q8BI21 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf38Q8BI21 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf38Q8BI21 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf38Q8BI21 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf38Q8BI21 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Rnf38Q8BI21 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf38Q8BI21 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf38Q8BI21 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf38Q8BI21 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf38Q8BI21 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf38Q8BI21 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20■□□□□ 0.79
Rnf38Q8BI21 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf38Q8BI21 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf38Q8BI21 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf38Q8BI21 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20■□□□□ 0.79
Rnf38Q8BI21 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf38Q8BI21 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf38Q8BI21 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf38Q8BI21 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rnf38Q8BI21 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Rnf38Q8BI21 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf38Q8BI21 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rnf38Q8BI21 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf38Q8BI21 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf38Q8BI21 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Gm10420-201ENSMUST00000121713 882 ntBASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf38Q8BI21 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf38Q8BI21 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf38Q8BI21 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf38Q8BI21 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf38Q8BI21 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf38Q8BI21 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.92■□□□□ 0.78
Rnf38Q8BI21 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms