Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn3Q8BHH8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.42■□□□□ 0.7
Clrn3Q8BHH8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.42■□□□□ 0.7
Clrn3Q8BHH8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.42■□□□□ 0.7
Clrn3Q8BHH8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn3Q8BHH8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn3Q8BHH8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clrn3Q8BHH8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn3Q8BHH8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clrn3Q8BHH8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Clrn3Q8BHH8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.4■□□□□ 0.7
Clrn3Q8BHH8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn3Q8BHH8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn3Q8BHH8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
Clrn3Q8BHH8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn3Q8BHH8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn3Q8BHH8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Gm10232-201ENSMUST00000089221 720 ntBASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn3Q8BHH8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn3Q8BHH8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn3Q8BHH8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn3Q8BHH8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn3Q8BHH8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn3Q8BHH8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn3Q8BHH8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn3Q8BHH8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn3Q8BHH8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn3Q8BHH8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clrn3Q8BHH8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn3Q8BHH8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn3Q8BHH8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn3Q8BHH8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Clrn3Q8BHH8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Clrn3Q8BHH8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn3Q8BHH8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn3Q8BHH8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn3Q8BHH8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Clrn3Q8BHH8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clrn3Q8BHH8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Clrn3Q8BHH8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.33■□□□□ 0.68
Clrn3Q8BHH8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.33■□□□□ 0.68
Clrn3Q8BHH8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn3Q8BHH8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn3Q8BHH8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Clrn3Q8BHH8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn3Q8BHH8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn3Q8BHH8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.32■□□□□ 0.68
Clrn3Q8BHH8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clrn3Q8BHH8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn3Q8BHH8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clrn3Q8BHH8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clrn3Q8BHH8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms