Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Depdc1bQ8BH88 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Depdc1bQ8BH88 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Depdc1bQ8BH88 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Depdc1bQ8BH88 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Depdc1bQ8BH88 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Depdc1bQ8BH88 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Depdc1bQ8BH88 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Depdc1bQ8BH88 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Depdc1bQ8BH88 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Depdc1bQ8BH88 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1bQ8BH88 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1bQ8BH88 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1bQ8BH88 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1bQ8BH88 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1bQ8BH88 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1bQ8BH88 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1bQ8BH88 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1bQ8BH88 Gm15039-201ENSMUST00000118914 875 ntBASIC22.47■■□□□ 1.19
Depdc1bQ8BH88 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Depdc1bQ8BH88 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.47■■□□□ 1.19
Depdc1bQ8BH88 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Depdc1bQ8BH88 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1bQ8BH88 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1bQ8BH88 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Etf1-202ENSMUST00000180351 108 ntBASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1bQ8BH88 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.45■■□□□ 1.19
Depdc1bQ8BH88 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Depdc1bQ8BH88 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1bQ8BH88 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Depdc1bQ8BH88 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.44■■□□□ 1.18
Depdc1bQ8BH88 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.44■■□□□ 1.18
Depdc1bQ8BH88 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Depdc1bQ8BH88 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Depdc1bQ8BH88 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1bQ8BH88 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1bQ8BH88 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.43■■□□□ 1.18
Depdc1bQ8BH88 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.43■■□□□ 1.18
Depdc1bQ8BH88 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
Depdc1bQ8BH88 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1bQ8BH88 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1bQ8BH88 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
Depdc1bQ8BH88 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1bQ8BH88 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms