Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg4bQ8BGE6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atg4bQ8BGE6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atg4bQ8BGE6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atg4bQ8BGE6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atg4bQ8BGE6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Atg4bQ8BGE6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg4bQ8BGE6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atg4bQ8BGE6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atg4bQ8BGE6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atg4bQ8BGE6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Atg4bQ8BGE6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.54■□□□□ 0.72
Atg4bQ8BGE6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atg4bQ8BGE6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atg4bQ8BGE6 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.54■□□□□ 0.72
Atg4bQ8BGE6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Gm40881-201ENSMUST00000223397 166 ntBASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Atg4bQ8BGE6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atg4bQ8BGE6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Atg4bQ8BGE6 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.52■□□□□ 0.72
Atg4bQ8BGE6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atg4bQ8BGE6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atg4bQ8BGE6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atg4bQ8BGE6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atg4bQ8BGE6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atg4bQ8BGE6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Atg4bQ8BGE6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Atg4bQ8BGE6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atg4bQ8BGE6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atg4bQ8BGE6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Atg4bQ8BGE6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atg4bQ8BGE6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms