Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubp1Q811S7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubp1Q811S7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Etf1-202ENSMUST00000180351 108 ntBASIC20.46■□□□□ 0.87
Ubp1Q811S7 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.46■□□□□ 0.87
Ubp1Q811S7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubp1Q811S7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.45■□□□□ 0.86
Ubp1Q811S7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubp1Q811S7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ubp1Q811S7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ubp1Q811S7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubp1Q811S7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ubp1Q811S7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubp1Q811S7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubp1Q811S7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ubp1Q811S7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.44■□□□□ 0.86
Ubp1Q811S7 Rps24-207ENSMUST00000224568 714 ntBASIC20.44■□□□□ 0.86
Ubp1Q811S7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.44■□□□□ 0.86
Ubp1Q811S7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.43■□□□□ 0.86
Ubp1Q811S7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.43■□□□□ 0.86
Ubp1Q811S7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ubp1Q811S7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.43■□□□□ 0.86
Ubp1Q811S7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.43■□□□□ 0.86
Ubp1Q811S7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.43■□□□□ 0.86
Ubp1Q811S7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubp1Q811S7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubp1Q811S7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Ubp1Q811S7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.42■□□□□ 0.86
Ubp1Q811S7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ubp1Q811S7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubp1Q811S7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubp1Q811S7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubp1Q811S7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubp1Q811S7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubp1Q811S7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubp1Q811S7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.41■□□□□ 0.86
Ubp1Q811S7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.41■□□□□ 0.86
Ubp1Q811S7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.41■□□□□ 0.86
Ubp1Q811S7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubp1Q811S7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubp1Q811S7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubp1Q811S7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubp1Q811S7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubp1Q811S7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ubp1Q811S7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ubp1Q811S7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ubp1Q811S7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ubp1Q811S7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.39■□□□□ 0.86
Ubp1Q811S7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.39■□□□□ 0.85
Ubp1Q811S7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ubp1Q811S7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubp1Q811S7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubp1Q811S7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubp1Q811S7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubp1Q811S7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.38■□□□□ 0.85
Ubp1Q811S7 Gm7417-201ENSMUST00000192950 473 ntBASIC20.38■□□□□ 0.85
Ubp1Q811S7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.38■□□□□ 0.85
Ubp1Q811S7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ubp1Q811S7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ubp1Q811S7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ubp1Q811S7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.37■□□□□ 0.85
Ubp1Q811S7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubp1Q811S7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubp1Q811S7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubp1Q811S7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubp1Q811S7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Ubp1Q811S7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubp1Q811S7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubp1Q811S7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubp1Q811S7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms