Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc4Q6S5L9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc4Q6S5L9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shc4Q6S5L9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shc4Q6S5L9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shc4Q6S5L9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shc4Q6S5L9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Shc4Q6S5L9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc4Q6S5L9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shc4Q6S5L9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Shc4Q6S5L9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shc4Q6S5L9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc4Q6S5L9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc4Q6S5L9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc4Q6S5L9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc4Q6S5L9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Shc4Q6S5L9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc4Q6S5L9 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.39■□□□□ 0.69
Shc4Q6S5L9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shc4Q6S5L9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc4Q6S5L9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shc4Q6S5L9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc4Q6S5L9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc4Q6S5L9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Shc4Q6S5L9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc4Q6S5L9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc4Q6S5L9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc4Q6S5L9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Shc4Q6S5L9 Gm21956-201ENSMUST00000179946 522 ntBASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shc4Q6S5L9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 336.8 ms