Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.25■□□□□ 0.83
Zc3h11aQ6NZF1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h11aQ6NZF1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Zc3h11aQ6NZF1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h11aQ6NZF1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h11aQ6NZF1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.25■□□□□ 0.83
Zc3h11aQ6NZF1 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.25■□□□□ 0.83
Zc3h11aQ6NZF1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Zc3h11aQ6NZF1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zc3h11aQ6NZF1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.22■□□□□ 0.83
Zc3h11aQ6NZF1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Zc3h11aQ6NZF1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.22■□□□□ 0.83
Zc3h11aQ6NZF1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Zc3h11aQ6NZF1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zc3h11aQ6NZF1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zc3h11aQ6NZF1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zc3h11aQ6NZF1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h11aQ6NZF1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.2■□□□□ 0.83
Zc3h11aQ6NZF1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h11aQ6NZF1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h11aQ6NZF1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h11aQ6NZF1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h11aQ6NZF1 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.2■□□□□ 0.82
Zc3h11aQ6NZF1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Zc3h11aQ6NZF1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h11aQ6NZF1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h11aQ6NZF1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h11aQ6NZF1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h11aQ6NZF1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h11aQ6NZF1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h11aQ6NZF1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h11aQ6NZF1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Gm40881-201ENSMUST00000223397 166 ntBASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h11aQ6NZF1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h11aQ6NZF1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h11aQ6NZF1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h11aQ6NZF1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.15■□□□□ 0.82
Zc3h11aQ6NZF1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.15■□□□□ 0.82
Zc3h11aQ6NZF1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms