Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Krt42Q6IFX2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Krt42Q6IFX2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Krt42Q6IFX2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Krt42Q6IFX2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt42Q6IFX2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt42Q6IFX2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt42Q6IFX2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Krt42Q6IFX2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.36■■□□□ 1.01
Krt42Q6IFX2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Krt42Q6IFX2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt42Q6IFX2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Krt42Q6IFX2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt42Q6IFX2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Gm8503-201ENSMUST00000118131 455 ntBASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
Krt42Q6IFX2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Krt42Q6IFX2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Krt42Q6IFX2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Krt42Q6IFX2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.32■■□□□ 1
Krt42Q6IFX2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Krt42Q6IFX2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.32■■□□□ 1
Krt42Q6IFX2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Krt42Q6IFX2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.32■■□□□ 1
Krt42Q6IFX2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Krt42Q6IFX2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.31■■□□□ 1
Krt42Q6IFX2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Krt42Q6IFX2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Krt42Q6IFX2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Krt42Q6IFX2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Krt42Q6IFX2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Krt42Q6IFX2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Krt42Q6IFX2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Krt42Q6IFX2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Krt42Q6IFX2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.3■■□□□ 1
Krt42Q6IFX2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Krt42Q6IFX2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Krt42Q6IFX2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.3■■□□□ 1
Krt42Q6IFX2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.3■■□□□ 1
Krt42Q6IFX2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krt42Q6IFX2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krt42Q6IFX2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.29■■□□□ 1
Krt42Q6IFX2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.29■■□□□ 1
Krt42Q6IFX2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Krt42Q6IFX2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.29■■□□□ 1
Krt42Q6IFX2 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.29■■□□□ 1
Krt42Q6IFX2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krt42Q6IFX2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krt42Q6IFX2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Krt42Q6IFX2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt42Q6IFX2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt42Q6IFX2 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.28■■□□□ 1
Krt42Q6IFX2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.28■■□□□ 1
Krt42Q6IFX2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt42Q6IFX2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.28■■□□□ 1
Krt42Q6IFX2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt42Q6IFX2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Krt42Q6IFX2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms