Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col7a1Q63870 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col7a1Q63870 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col7a1Q63870 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col7a1Q63870 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.87■□□□□ 0.45
Col7a1Q63870 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Col7a1Q63870 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.87■□□□□ 0.45
Col7a1Q63870 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col7a1Q63870 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.86■□□□□ 0.45
Col7a1Q63870 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col7a1Q63870 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.86■□□□□ 0.45
Col7a1Q63870 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col7a1Q63870 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.85■□□□□ 0.45
Col7a1Q63870 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.85■□□□□ 0.45
Col7a1Q63870 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.85■□□□□ 0.45
Col7a1Q63870 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col7a1Q63870 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Col7a1Q63870 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col7a1Q63870 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col7a1Q63870 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col7a1Q63870 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col7a1Q63870 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.84■□□□□ 0.45
Col7a1Q63870 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col7a1Q63870 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col7a1Q63870 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col7a1Q63870 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col7a1Q63870 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col7a1Q63870 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Col7a1Q63870 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col7a1Q63870 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col7a1Q63870 Gm20760-201ENSMUST00000179197 648 ntBASIC17.84■□□□□ 0.45
Col7a1Q63870 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.83■□□□□ 0.45
Col7a1Q63870 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Col7a1Q63870 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col7a1Q63870 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
Col7a1Q63870 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
Col7a1Q63870 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col7a1Q63870 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Col7a1Q63870 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col7a1Q63870 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col7a1Q63870 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col7a1Q63870 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.82■□□□□ 0.44
Col7a1Q63870 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col7a1Q63870 Gm12441-201ENSMUST00000121806 588 ntBASIC17.82■□□□□ 0.44
Col7a1Q63870 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.82■□□□□ 0.44
Col7a1Q63870 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col7a1Q63870 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col7a1Q63870 Gm7143-201ENSMUST00000222811 859 ntBASIC17.82■□□□□ 0.44
Col7a1Q63870 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col7a1Q63870 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col7a1Q63870 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col7a1Q63870 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col7a1Q63870 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col7a1Q63870 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col7a1Q63870 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col7a1Q63870 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col7a1Q63870 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col7a1Q63870 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.8■□□□□ 0.44
Col7a1Q63870 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col7a1Q63870 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Col7a1Q63870 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Col7a1Q63870 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col7a1Q63870 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.8■□□□□ 0.44
Col7a1Q63870 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Col7a1Q63870 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.79■□□□□ 0.44
Col7a1Q63870 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col7a1Q63870 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.79■□□□□ 0.44
Col7a1Q63870 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col7a1Q63870 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col7a1Q63870 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col7a1Q63870 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.78■□□□□ 0.44
Col7a1Q63870 Gm8520-201ENSMUST00000186517 868 ntBASIC17.78■□□□□ 0.44
Col7a1Q63870 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col7a1Q63870 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.78■□□□□ 0.44
Col7a1Q63870 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col7a1Q63870 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.77■□□□□ 0.44
Col7a1Q63870 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.77■□□□□ 0.44
Col7a1Q63870 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col7a1Q63870 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col7a1Q63870 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col7a1Q63870 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col7a1Q63870 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Col7a1Q63870 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col7a1Q63870 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col7a1Q63870 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col7a1Q63870 Gm42778-201ENSMUST00000199644 553 ntBASIC17.76■□□□□ 0.43
Col7a1Q63870 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col7a1Q63870 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Col7a1Q63870 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms