Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd47Q61735 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cd47Q61735 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.83■□□□□ 0.61
Cd47Q61735 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cd47Q61735 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cd47Q61735 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cd47Q61735 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cd47Q61735 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd47Q61735 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cd47Q61735 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.83■□□□□ 0.6
Cd47Q61735 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd47Q61735 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd47Q61735 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cd47Q61735 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd47Q61735 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cd47Q61735 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cd47Q61735 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cd47Q61735 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd47Q61735 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd47Q61735 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.81■□□□□ 0.6
Cd47Q61735 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd47Q61735 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd47Q61735 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd47Q61735 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd47Q61735 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.8■□□□□ 0.6
Cd47Q61735 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd47Q61735 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd47Q61735 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd47Q61735 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd47Q61735 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cd47Q61735 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd47Q61735 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cd47Q61735 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.79■□□□□ 0.6
Cd47Q61735 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd47Q61735 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd47Q61735 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd47Q61735 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cd47Q61735 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd47Q61735 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd47Q61735 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd47Q61735 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.78■□□□□ 0.6
Cd47Q61735 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd47Q61735 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd47Q61735 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd47Q61735 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd47Q61735 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.77■□□□□ 0.6
Cd47Q61735 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cd47Q61735 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.77■□□□□ 0.6
Cd47Q61735 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.77■□□□□ 0.6
Cd47Q61735 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cd47Q61735 Cap2-205ENSMUST00000225824 1634 ntBASIC18.77■□□□□ 0.6
Cd47Q61735 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd47Q61735 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd47Q61735 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cd47Q61735 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Cd47Q61735 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cd47Q61735 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd47Q61735 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd47Q61735 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd47Q61735 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd47Q61735 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Cd47Q61735 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.76■□□□□ 0.59
Cd47Q61735 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.76■□□□□ 0.59
Cd47Q61735 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd47Q61735 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd47Q61735 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd47Q61735 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cd47Q61735 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cd47Q61735 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.75■□□□□ 0.59
Cd47Q61735 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Cd47Q61735 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd47Q61735 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd47Q61735 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd47Q61735 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd47Q61735 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms