Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.28■□□□□ 0.2
Trp53rkaQ5U452 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trp53rkaQ5U452 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.26■□□□□ 0.19
Trp53rkaQ5U452 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.25■□□□□ 0.19
Trp53rkaQ5U452 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trp53rkaQ5U452 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trp53rkaQ5U452 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trp53rkaQ5U452 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trp53rkaQ5U452 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.24■□□□□ 0.19
Trp53rkaQ5U452 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trp53rkaQ5U452 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trp53rkaQ5U452 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trp53rkaQ5U452 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trp53rkaQ5U452 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trp53rkaQ5U452 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.21■□□□□ 0.19
Trp53rkaQ5U452 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trp53rkaQ5U452 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trp53rkaQ5U452 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trp53rkaQ5U452 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trp53rkaQ5U452 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.21■□□□□ 0.19
Trp53rkaQ5U452 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trp53rkaQ5U452 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trp53rkaQ5U452 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trp53rkaQ5U452 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms