Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ubr3Q5U430 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ubr3Q5U430 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ubr3Q5U430 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.03■■□□□ 1.76
Ubr3Q5U430 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC26.03■■□□□ 1.76
Ubr3Q5U430 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ubr3Q5U430 Gm10129-202ENSMUST00000193100 1316 ntBASIC26.03■■□□□ 1.76
Ubr3Q5U430 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ubr3Q5U430 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ubr3Q5U430 Gm7160-202ENSMUST00000188519 1027 ntBASIC26.02■■□□□ 1.76
Ubr3Q5U430 AC099934.2-201ENSMUST00000196389 70 ntBASIC26.02■■□□□ 1.76
Ubr3Q5U430 AC156953.1-201ENSMUST00000196953 70 ntBASIC26.02■■□□□ 1.76
Ubr3Q5U430 AC157822.2-201ENSMUST00000200291 70 ntBASIC26.02■■□□□ 1.76
Ubr3Q5U430 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC26.02■■□□□ 1.76
Ubr3Q5U430 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Ubr3Q5U430 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr3Q5U430 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr3Q5U430 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr3Q5U430 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr3Q5U430 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr3Q5U430 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr3Q5U430 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr3Q5U430 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
Ubr3Q5U430 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ubr3Q5U430 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
Ubr3Q5U430 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr3Q5U430 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr3Q5U430 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr3Q5U430 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Ubr3Q5U430 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr3Q5U430 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr3Q5U430 Gm6085-201ENSMUST00000182774 1470 ntBASIC25.99■■□□□ 1.75
Ubr3Q5U430 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr3Q5U430 Gm42569-201ENSMUST00000200539 472 ntBASIC25.98■■□□□ 1.75
Ubr3Q5U430 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr3Q5U430 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr3Q5U430 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr3Q5U430 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr3Q5U430 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ubr3Q5U430 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ubr3Q5U430 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.97■■□□□ 1.75
Ubr3Q5U430 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Ubr3Q5U430 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC25.96■■□□□ 1.75
Ubr3Q5U430 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ubr3Q5U430 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ubr3Q5U430 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ubr3Q5U430 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Ubr3Q5U430 Gm40848-201ENSMUST00000221998 324 ntBASIC25.95■■□□□ 1.74
Ubr3Q5U430 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ubr3Q5U430 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Ubr3Q5U430 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr3Q5U430 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Ubr3Q5U430 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr3Q5U430 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr3Q5U430 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Gm43530-201ENSMUST00000195920 274 ntBASIC25.92■■□□□ 1.74
Ubr3Q5U430 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr3Q5U430 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr3Q5U430 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Ubr3Q5U430 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ubr3Q5U430 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ubr3Q5U430 Gm10033-202ENSMUST00000211874 928 ntBASIC25.9■■□□□ 1.74
Ubr3Q5U430 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr3Q5U430 Gm43060-201ENSMUST00000200621 289 ntBASIC25.89■■□□□ 1.74
Ubr3Q5U430 CT025689.6-201ENSMUST00000224991 1104 ntBASIC25.89■■□□□ 1.74
Ubr3Q5U430 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr3Q5U430 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr3Q5U430 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Ubr3Q5U430 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Ubr3Q5U430 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.88■■□□□ 1.73
Ubr3Q5U430 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ubr3Q5U430 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr3Q5U430 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr3Q5U430 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC25.87■■□□□ 1.73
Ubr3Q5U430 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr3Q5U430 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Ubr3Q5U430 AC112142.1-201ENSMUST00000228796 918 ntBASIC25.87■■□□□ 1.73
Ubr3Q5U430 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms