Protein–RNA interactions for Protein: Q3UYV9

Ncbp1, Nuclear cap-binding protein subunit 1, mousemouse

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp1Q3UYV9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ncbp1Q3UYV9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ncbp1Q3UYV9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ncbp1Q3UYV9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ncbp1Q3UYV9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ncbp1Q3UYV9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.83■■□□□ 1.57
Ncbp1Q3UYV9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.83■■□□□ 1.57
Ncbp1Q3UYV9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ncbp1Q3UYV9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
Ncbp1Q3UYV9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ncbp1Q3UYV9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Gm12922-201ENSMUST00000120626 809 ntBASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ncbp1Q3UYV9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.8■■□□□ 1.56
Ncbp1Q3UYV9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.8■■□□□ 1.56
Ncbp1Q3UYV9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ncbp1Q3UYV9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.8■■□□□ 1.56
Ncbp1Q3UYV9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ncbp1Q3UYV9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.78■■□□□ 1.56
Ncbp1Q3UYV9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Ncbp1Q3UYV9 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.78■■□□□ 1.56
Ncbp1Q3UYV9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ncbp1Q3UYV9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ncbp1Q3UYV9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Ncbp1Q3UYV9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ncbp1Q3UYV9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ncbp1Q3UYV9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ncbp1Q3UYV9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Ncbp1Q3UYV9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ncbp1Q3UYV9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Ncbp1Q3UYV9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Ncbp1Q3UYV9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ncbp1Q3UYV9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.73■■□□□ 1.55
Ncbp1Q3UYV9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.73■■□□□ 1.55
Ncbp1Q3UYV9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ncbp1Q3UYV9 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.72■■□□□ 1.55
Ncbp1Q3UYV9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ncbp1Q3UYV9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.72■■□□□ 1.55
Ncbp1Q3UYV9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ncbp1Q3UYV9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ncbp1Q3UYV9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Ncbp1Q3UYV9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Ncbp1Q3UYV9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
Ncbp1Q3UYV9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ncbp1Q3UYV9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ncbp1Q3UYV9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms