Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm29609Q3UU56 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Gm29609Q3UU56 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.77■■□□□ 1.07
Gm29609Q3UU56 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm29609Q3UU56 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.76■■□□□ 1.07
Gm29609Q3UU56 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Gm29609Q3UU56 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm29609Q3UU56 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm29609Q3UU56 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm29609Q3UU56 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm29609Q3UU56 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm29609Q3UU56 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm29609Q3UU56 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm29609Q3UU56 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm29609Q3UU56 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm29609Q3UU56 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm29609Q3UU56 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.73■■□□□ 1.07
Gm29609Q3UU56 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm29609Q3UU56 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Gm29609Q3UU56 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm29609Q3UU56 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm29609Q3UU56 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Gm29609Q3UU56 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm29609Q3UU56 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm29609Q3UU56 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.72■■□□□ 1.07
Gm29609Q3UU56 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm29609Q3UU56 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm29609Q3UU56 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Gm29609Q3UU56 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.71■■□□□ 1.07
Gm29609Q3UU56 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Gm29609Q3UU56 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm29609Q3UU56 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm29609Q3UU56 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Gm29609Q3UU56 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm29609Q3UU56 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm29609Q3UU56 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm29609Q3UU56 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm29609Q3UU56 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
Gm29609Q3UU56 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.69■■□□□ 1.06
Gm29609Q3UU56 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.69■■□□□ 1.06
Gm29609Q3UU56 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm29609Q3UU56 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm29609Q3UU56 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm29609Q3UU56 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
Gm29609Q3UU56 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm29609Q3UU56 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Gm29609Q3UU56 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Gm29609Q3UU56 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Gm29609Q3UU56 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Gm29609Q3UU56 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm29609Q3UU56 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm29609Q3UU56 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm29609Q3UU56 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm29609Q3UU56 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms