Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim72Q1XH17 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trim72Q1XH17 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim72Q1XH17 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim72Q1XH17 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.24■■□□□ 1.15
Trim72Q1XH17 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trim72Q1XH17 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.24■■□□□ 1.15
Trim72Q1XH17 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim72Q1XH17 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim72Q1XH17 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trim72Q1XH17 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.23■■□□□ 1.15
Trim72Q1XH17 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.23■■□□□ 1.15
Trim72Q1XH17 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim72Q1XH17 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
Trim72Q1XH17 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.23■■□□□ 1.15
Trim72Q1XH17 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Trim72Q1XH17 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim72Q1XH17 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.22■■□□□ 1.15
Trim72Q1XH17 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim72Q1XH17 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.22■■□□□ 1.15
Trim72Q1XH17 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.22■■□□□ 1.15
Trim72Q1XH17 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim72Q1XH17 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim72Q1XH17 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim72Q1XH17 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.21■■□□□ 1.15
Trim72Q1XH17 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Trim72Q1XH17 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim72Q1XH17 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Trim72Q1XH17 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trim72Q1XH17 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim72Q1XH17 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim72Q1XH17 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trim72Q1XH17 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim72Q1XH17 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trim72Q1XH17 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.19■■□□□ 1.14
Trim72Q1XH17 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim72Q1XH17 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim72Q1XH17 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim72Q1XH17 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim72Q1XH17 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim72Q1XH17 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim72Q1XH17 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim72Q1XH17 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim72Q1XH17 Gm15820-201ENSMUST00000201566 728 ntBASIC22.17■■□□□ 1.14
Trim72Q1XH17 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim72Q1XH17 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim72Q1XH17 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim72Q1XH17 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim72Q1XH17 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim72Q1XH17 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim72Q1XH17 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
Trim72Q1XH17 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim72Q1XH17 Gm15546-201ENSMUST00000122095 826 ntBASIC22.16■■□□□ 1.14
Trim72Q1XH17 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.16■■□□□ 1.14
Trim72Q1XH17 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim72Q1XH17 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.16■■□□□ 1.14
Trim72Q1XH17 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim72Q1XH17 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim72Q1XH17 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trim72Q1XH17 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trim72Q1XH17 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
Trim72Q1XH17 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Trim72Q1XH17 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Trim72Q1XH17 Gm40881-201ENSMUST00000223397 166 ntBASIC22.14■■□□□ 1.13
Trim72Q1XH17 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim72Q1XH17 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim72Q1XH17 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.14■■□□□ 1.13
Trim72Q1XH17 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
Trim72Q1XH17 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.13■■□□□ 1.13
Trim72Q1XH17 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim72Q1XH17 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trim72Q1XH17 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim72Q1XH17 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.13■■□□□ 1.13
Trim72Q1XH17 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim72Q1XH17 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.12■■□□□ 1.13
Trim72Q1XH17 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim72Q1XH17 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim72Q1XH17 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim72Q1XH17 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim72Q1XH17 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.12■■□□□ 1.13
Trim72Q1XH17 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim72Q1XH17 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms