Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf4Q06507 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf4Q06507 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Atf4Q06507 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf4Q06507 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf4Q06507 Gm18284-201ENSMUST00000172604 624 ntBASIC19.5■□□□□ 0.71
Atf4Q06507 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Atf4Q06507 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf4Q06507 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Atf4Q06507 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.5■□□□□ 0.71
Atf4Q06507 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.49■□□□□ 0.71
Atf4Q06507 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.49■□□□□ 0.71
Atf4Q06507 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Atf4Q06507 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf4Q06507 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf4Q06507 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf4Q06507 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Atf4Q06507 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Atf4Q06507 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf4Q06507 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.48■□□□□ 0.71
Atf4Q06507 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Atf4Q06507 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf4Q06507 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf4Q06507 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Atf4Q06507 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atf4Q06507 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.48■□□□□ 0.71
Atf4Q06507 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf4Q06507 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atf4Q06507 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.46■□□□□ 0.71
Atf4Q06507 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf4Q06507 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atf4Q06507 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.46■□□□□ 0.71
Atf4Q06507 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.46■□□□□ 0.71
Atf4Q06507 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atf4Q06507 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Atf4Q06507 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf4Q06507 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atf4Q06507 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.45■□□□□ 0.7
Atf4Q06507 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf4Q06507 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf4Q06507 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf4Q06507 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atf4Q06507 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf4Q06507 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Atf4Q06507 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf4Q06507 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf4Q06507 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atf4Q06507 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf4Q06507 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atf4Q06507 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf4Q06507 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf4Q06507 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Atf4Q06507 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf4Q06507 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf4Q06507 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf4Q06507 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.43■□□□□ 0.7
Atf4Q06507 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.43■□□□□ 0.7
Atf4Q06507 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf4Q06507 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf4Q06507 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf4Q06507 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Atf4Q06507 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf4Q06507 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf4Q06507 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf4Q06507 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atf4Q06507 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf4Q06507 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf4Q06507 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf4Q06507 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.4■□□□□ 0.7
Atf4Q06507 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.4■□□□□ 0.7
Atf4Q06507 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf4Q06507 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Atf4Q06507 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Atf4Q06507 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Atf4Q06507 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf4Q06507 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf4Q06507 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms