Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shc1P98083 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shc1P98083 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.68■□□□□ 0.58
Shc1P98083 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shc1P98083 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shc1P98083 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.68■□□□□ 0.58
Shc1P98083 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shc1P98083 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.68■□□□□ 0.58
Shc1P98083 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shc1P98083 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shc1P98083 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shc1P98083 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shc1P98083 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shc1P98083 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shc1P98083 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shc1P98083 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shc1P98083 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shc1P98083 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shc1P98083 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shc1P98083 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shc1P98083 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shc1P98083 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.66■□□□□ 0.58
Shc1P98083 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shc1P98083 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Shc1P98083 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shc1P98083 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shc1P98083 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shc1P98083 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.65■□□□□ 0.58
Shc1P98083 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.65■□□□□ 0.58
Shc1P98083 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shc1P98083 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shc1P98083 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shc1P98083 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shc1P98083 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shc1P98083 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.65■□□□□ 0.58
Shc1P98083 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Shc1P98083 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shc1P98083 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shc1P98083 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shc1P98083 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shc1P98083 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.64■□□□□ 0.57
Shc1P98083 Gm7417-201ENSMUST00000192950 473 ntBASIC18.64■□□□□ 0.57
Shc1P98083 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.64■□□□□ 0.57
Shc1P98083 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shc1P98083 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shc1P98083 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shc1P98083 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shc1P98083 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.63■□□□□ 0.57
Shc1P98083 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.63■□□□□ 0.57
Shc1P98083 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.63■□□□□ 0.57
Shc1P98083 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Shc1P98083 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shc1P98083 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shc1P98083 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shc1P98083 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Shc1P98083 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shc1P98083 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shc1P98083 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shc1P98083 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shc1P98083 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shc1P98083 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shc1P98083 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shc1P98083 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.61■□□□□ 0.57
Shc1P98083 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shc1P98083 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Shc1P98083 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shc1P98083 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shc1P98083 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shc1P98083 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shc1P98083 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shc1P98083 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shc1P98083 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Shc1P98083 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shc1P98083 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.6■□□□□ 0.57
Shc1P98083 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shc1P98083 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.6■□□□□ 0.57
Shc1P98083 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shc1P98083 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shc1P98083 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shc1P98083 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Shc1P98083 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.59■□□□□ 0.57
Shc1P98083 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shc1P98083 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shc1P98083 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shc1P98083 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shc1P98083 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shc1P98083 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shc1P98083 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Shc1P98083 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Shc1P98083 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Shc1P98083 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shc1P98083 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.58■□□□□ 0.56
Shc1P98083 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.58■□□□□ 0.56
Shc1P98083 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shc1P98083 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shc1P98083 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shc1P98083 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shc1P98083 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.57■□□□□ 0.56
Shc1P98083 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shc1P98083 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms