Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube2d3P61079 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube2d3P61079 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube2d3P61079 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.8□□□□□ -0.04
Ube2d3P61079 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube2d3P61079 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube2d3P61079 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube2d3P61079 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.8□□□□□ -0.04
Ube2d3P61079 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube2d3P61079 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ube2d3P61079 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube2d3P61079 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube2d3P61079 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.79□□□□□ -0.04
Ube2d3P61079 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Ube2d3P61079 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube2d3P61079 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ube2d3P61079 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.78□□□□□ -0.04
Ube2d3P61079 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube2d3P61079 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube2d3P61079 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube2d3P61079 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube2d3P61079 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Ube2d3P61079 Mir6538-201ENSMUST00000183713 110 ntBASIC14.77□□□□□ -0.05
Ube2d3P61079 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Ube2d3P61079 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ube2d3P61079 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube2d3P61079 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube2d3P61079 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube2d3P61079 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube2d3P61079 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ube2d3P61079 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube2d3P61079 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube2d3P61079 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube2d3P61079 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
Ube2d3P61079 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.76□□□□□ -0.05
Ube2d3P61079 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube2d3P61079 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube2d3P61079 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Ube2d3P61079 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube2d3P61079 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.75□□□□□ -0.05
Ube2d3P61079 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.75□□□□□ -0.05
Ube2d3P61079 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.75□□□□□ -0.05
Ube2d3P61079 Gm12366-201ENSMUST00000121722 873 ntBASIC14.75□□□□□ -0.05
Ube2d3P61079 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.75□□□□□ -0.05
Ube2d3P61079 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.75□□□□□ -0.05
Ube2d3P61079 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.75□□□□□ -0.05
Ube2d3P61079 Gm5786-201ENSMUST00000085368 882 ntBASIC14.75□□□□□ -0.05
Ube2d3P61079 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ube2d3P61079 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ube2d3P61079 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube2d3P61079 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.75□□□□□ -0.05
Ube2d3P61079 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.74□□□□□ -0.05
Ube2d3P61079 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Ube2d3P61079 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ube2d3P61079 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube2d3P61079 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ube2d3P61079 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.73□□□□□ -0.05
Ube2d3P61079 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms