Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox1P53783 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Sox1P53783 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox1P53783 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.57■■□□□ 1.04
Sox1P53783 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox1P53783 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox1P53783 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox1P53783 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.57■■□□□ 1.04
Sox1P53783 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sox1P53783 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox1P53783 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox1P53783 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox1P53783 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox1P53783 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.56■■□□□ 1.04
Sox1P53783 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox1P53783 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox1P53783 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox1P53783 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.56■■□□□ 1.04
Sox1P53783 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox1P53783 Gm22240-201ENSMUST00000175225 82 ntBASIC21.55■■□□□ 1.04
Sox1P53783 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox1P53783 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sox1P53783 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox1P53783 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sox1P53783 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox1P53783 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.55■■□□□ 1.04
Sox1P53783 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox1P53783 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sox1P53783 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sox1P53783 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.54■■□□□ 1.04
Sox1P53783 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox1P53783 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.54■■□□□ 1.04
Sox1P53783 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox1P53783 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Sox1P53783 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox1P53783 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sox1P53783 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox1P53783 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.53■■□□□ 1.04
Sox1P53783 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox1P53783 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox1P53783 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.52■■□□□ 1.04
Sox1P53783 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sox1P53783 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.51■■□□□ 1.03
Sox1P53783 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.51■■□□□ 1.03
Sox1P53783 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.51■■□□□ 1.03
Sox1P53783 Gm42778-201ENSMUST00000199644 553 ntBASIC21.51■■□□□ 1.03
Sox1P53783 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sox1P53783 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sox1P53783 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sox1P53783 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox1P53783 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox1P53783 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox1P53783 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox1P53783 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.5■■□□□ 1.03
Sox1P53783 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox1P53783 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox1P53783 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.49■■□□□ 1.03
Sox1P53783 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.49■■□□□ 1.03
Sox1P53783 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.49■■□□□ 1.03
Sox1P53783 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.49■■□□□ 1.03
Sox1P53783 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.49■■□□□ 1.03
Sox1P53783 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox1P53783 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox1P53783 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.48■■□□□ 1.03
Sox1P53783 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Sox1P53783 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox1P53783 Gm12441-201ENSMUST00000121806 588 ntBASIC21.47■■□□□ 1.03
Sox1P53783 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.47■■□□□ 1.03
Sox1P53783 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.47■■□□□ 1.03
Sox1P53783 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.47■■□□□ 1.03
Sox1P53783 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox1P53783 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox1P53783 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox1P53783 Gm7143-201ENSMUST00000222811 859 ntBASIC21.46■■□□□ 1.03
Sox1P53783 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.46■■□□□ 1.03
Sox1P53783 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sox1P53783 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Sox1P53783 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Sox1P53783 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox1P53783 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox1P53783 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox1P53783 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sox1P53783 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.45■■□□□ 1.02
Sox1P53783 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sox1P53783 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox1P53783 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox1P53783 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Sox1P53783 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sox1P53783 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox1P53783 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox1P53783 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox1P53783 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms