Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lbx1P52955 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lbx1P52955 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lbx1P52955 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lbx1P52955 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Lbx1P52955 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lbx1P52955 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.39■□□□□ 0.86
Lbx1P52955 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Lbx1P52955 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Lbx1P52955 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lbx1P52955 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lbx1P52955 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lbx1P52955 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.38■□□□□ 0.85
Lbx1P52955 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.38■□□□□ 0.85
Lbx1P52955 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.38■□□□□ 0.85
Lbx1P52955 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lbx1P52955 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lbx1P52955 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.37■□□□□ 0.85
Lbx1P52955 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lbx1P52955 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lbx1P52955 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.37■□□□□ 0.85
Lbx1P52955 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.37■□□□□ 0.85
Lbx1P52955 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lbx1P52955 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Lbx1P52955 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lbx1P52955 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lbx1P52955 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.36■□□□□ 0.85
Lbx1P52955 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lbx1P52955 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lbx1P52955 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.35■□□□□ 0.85
Lbx1P52955 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.35■□□□□ 0.85
Lbx1P52955 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.35■□□□□ 0.85
Lbx1P52955 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.35■□□□□ 0.85
Lbx1P52955 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.35■□□□□ 0.85
Lbx1P52955 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.35■□□□□ 0.85
Lbx1P52955 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lbx1P52955 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lbx1P52955 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.34■□□□□ 0.85
Lbx1P52955 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lbx1P52955 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lbx1P52955 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lbx1P52955 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lbx1P52955 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Lbx1P52955 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lbx1P52955 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lbx1P52955 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lbx1P52955 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.32■□□□□ 0.84
Lbx1P52955 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.32■□□□□ 0.84
Lbx1P52955 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lbx1P52955 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lbx1P52955 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lbx1P52955 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lbx1P52955 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lbx1P52955 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.31■□□□□ 0.84
Lbx1P52955 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lbx1P52955 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.31■□□□□ 0.84
Lbx1P52955 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lbx1P52955 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lbx1P52955 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Lbx1P52955 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lbx1P52955 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lbx1P52955 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lbx1P52955 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lbx1P52955 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lbx1P52955 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lbx1P52955 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lbx1P52955 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lbx1P52955 Gm10812-201ENSMUST00000099864 546 ntBASIC20.3■□□□□ 0.84
Lbx1P52955 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Lbx1P52955 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Lbx1P52955 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Lbx1P52955 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lbx1P52955 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lbx1P52955 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lbx1P52955 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lbx1P52955 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.28■□□□□ 0.84
Lbx1P52955 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lbx1P52955 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lbx1P52955 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lbx1P52955 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lbx1P52955 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.27■□□□□ 0.84
Lbx1P52955 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lbx1P52955 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lbx1P52955 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lbx1P52955 Gm13168-201ENSMUST00000121771 632 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms