Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.61■□□□□ 0.89
Pdx1P52946 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdx1P52946 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdx1P52946 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdx1P52946 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdx1P52946 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.6■□□□□ 0.89
Pdx1P52946 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.6■□□□□ 0.89
Pdx1P52946 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdx1P52946 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdx1P52946 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdx1P52946 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdx1P52946 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdx1P52946 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdx1P52946 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdx1P52946 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdx1P52946 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdx1P52946 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pdx1P52946 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.59■□□□□ 0.89
Pdx1P52946 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdx1P52946 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pdx1P52946 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdx1P52946 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Pdx1P52946 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pdx1P52946 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdx1P52946 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.58■□□□□ 0.89
Pdx1P52946 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.58■□□□□ 0.89
Pdx1P52946 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdx1P52946 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdx1P52946 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdx1P52946 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdx1P52946 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdx1P52946 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Pdx1P52946 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pdx1P52946 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdx1P52946 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdx1P52946 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.57■□□□□ 0.88
Pdx1P52946 Gm40881-201ENSMUST00000223397 166 ntBASIC20.57■□□□□ 0.88
Pdx1P52946 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdx1P52946 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdx1P52946 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdx1P52946 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pdx1P52946 Gm9959-201ENSMUST00000068277 390 ntBASIC20.56■□□□□ 0.88
Pdx1P52946 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.56■□□□□ 0.88
Pdx1P52946 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.56■□□□□ 0.88
Pdx1P52946 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdx1P52946 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pdx1P52946 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pdx1P52946 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdx1P52946 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Pdx1P52946 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.55■□□□□ 0.88
Pdx1P52946 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdx1P52946 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdx1P52946 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdx1P52946 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdx1P52946 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdx1P52946 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdx1P52946 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdx1P52946 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdx1P52946 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.53■□□□□ 0.88
Pdx1P52946 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdx1P52946 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdx1P52946 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pdx1P52946 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdx1P52946 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdx1P52946 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdx1P52946 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pdx1P52946 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdx1P52946 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.52■□□□□ 0.87
Pdx1P52946 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pdx1P52946 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdx1P52946 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdx1P52946 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.51■□□□□ 0.87
Pdx1P52946 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdx1P52946 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdx1P52946 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.51■□□□□ 0.87
Pdx1P52946 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdx1P52946 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdx1P52946 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdx1P52946 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdx1P52946 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pdx1P52946 Etf1-202ENSMUST00000180351 108 ntBASIC20.5■□□□□ 0.87
Pdx1P52946 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Pdx1P52946 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdx1P52946 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdx1P52946 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdx1P52946 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pdx1P52946 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdx1P52946 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.49■□□□□ 0.87
Pdx1P52946 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdx1P52946 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.49■□□□□ 0.87
Pdx1P52946 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdx1P52946 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pdx1P52946 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms