Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Abca1P41233 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Abca1P41233 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Abca1P41233 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca1P41233 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca1P41233 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca1P41233 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Abca1P41233 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca1P41233 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.16■□□□□ 0.34
Abca1P41233 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca1P41233 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca1P41233 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca1P41233 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Abca1P41233 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca1P41233 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca1P41233 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca1P41233 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Abca1P41233 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.15■□□□□ 0.34
Abca1P41233 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca1P41233 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca1P41233 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca1P41233 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca1P41233 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Abca1P41233 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.14■□□□□ 0.34
Abca1P41233 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca1P41233 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.14■□□□□ 0.33
Abca1P41233 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.14■□□□□ 0.33
Abca1P41233 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.14■□□□□ 0.33
Abca1P41233 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca1P41233 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca1P41233 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Abca1P41233 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Abca1P41233 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Abca1P41233 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca1P41233 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca1P41233 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca1P41233 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca1P41233 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Abca1P41233 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Abca1P41233 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca1P41233 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.12■□□□□ 0.33
Abca1P41233 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca1P41233 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca1P41233 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Abca1P41233 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca1P41233 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
Abca1P41233 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.12■□□□□ 0.33
Abca1P41233 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca1P41233 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca1P41233 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca1P41233 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca1P41233 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abca1P41233 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca1P41233 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca1P41233 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.1■□□□□ 0.33
Abca1P41233 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abca1P41233 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Abca1P41233 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca1P41233 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca1P41233 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.1■□□□□ 0.33
Abca1P41233 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Abca1P41233 Gm43137-201ENSMUST00000198052 594 ntBASIC17.1■□□□□ 0.33
Abca1P41233 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca1P41233 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca1P41233 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca1P41233 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.09■□□□□ 0.33
Abca1P41233 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca1P41233 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.09■□□□□ 0.33
Abca1P41233 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Abca1P41233 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Abca1P41233 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Abca1P41233 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.09■□□□□ 0.33
Abca1P41233 Gm29257-201ENSMUST00000186115 639 ntBASIC17.09■□□□□ 0.33
Abca1P41233 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.09■□□□□ 0.33
Abca1P41233 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca1P41233 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca1P41233 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca1P41233 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca1P41233 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.09■□□□□ 0.33
Abca1P41233 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca1P41233 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Abca1P41233 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Abca1P41233 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abca1P41233 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abca1P41233 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca1P41233 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca1P41233 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca1P41233 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca1P41233 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.08■□□□□ 0.32
Abca1P41233 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca1P41233 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca1P41233 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca1P41233 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms