Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cxcl12P40224 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cxcl12P40224 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.77■■□□□ 1.07
Cxcl12P40224 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cxcl12P40224 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.76■■□□□ 1.07
Cxcl12P40224 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.76■■□□□ 1.07
Cxcl12P40224 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcl12P40224 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cxcl12P40224 Spcs1-204ENSMUST00000226782 949 ntBASIC21.75■■□□□ 1.07
Cxcl12P40224 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cxcl12P40224 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cxcl12P40224 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cxcl12P40224 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cxcl12P40224 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cxcl12P40224 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cxcl12P40224 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.73■■□□□ 1.07
Cxcl12P40224 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.72■■□□□ 1.07
Cxcl12P40224 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcl12P40224 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.72■■□□□ 1.07
Cxcl12P40224 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcl12P40224 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcl12P40224 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcl12P40224 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.72■■□□□ 1.07
Cxcl12P40224 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.72■■□□□ 1.07
Cxcl12P40224 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcl12P40224 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcl12P40224 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cxcl12P40224 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cxcl12P40224 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cxcl12P40224 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cxcl12P40224 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.71■■□□□ 1.07
Cxcl12P40224 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.71■■□□□ 1.07
Cxcl12P40224 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Cxcl12P40224 Gm18671-201ENSMUST00000214826 683 ntBASIC21.71■■□□□ 1.07
Cxcl12P40224 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cxcl12P40224 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.7■■□□□ 1.06
Cxcl12P40224 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cxcl12P40224 Gm40848-201ENSMUST00000221998 324 ntBASIC21.7■■□□□ 1.06
Cxcl12P40224 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cxcl12P40224 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cxcl12P40224 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cxcl12P40224 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.69■■□□□ 1.06
Cxcl12P40224 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cxcl12P40224 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.69■■□□□ 1.06
Cxcl12P40224 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cxcl12P40224 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Cxcl12P40224 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Cxcl12P40224 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cxcl12P40224 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cxcl12P40224 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cxcl12P40224 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cxcl12P40224 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.68■■□□□ 1.06
Cxcl12P40224 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.68■■□□□ 1.06
Cxcl12P40224 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cxcl12P40224 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.67■■□□□ 1.06
Cxcl12P40224 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cxcl12P40224 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cxcl12P40224 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cxcl12P40224 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cxcl12P40224 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cxcl12P40224 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cxcl12P40224 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
Cxcl12P40224 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
Cxcl12P40224 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cxcl12P40224 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Cxcl12P40224 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.65■■□□□ 1.06
Cxcl12P40224 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cxcl12P40224 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.06
Cxcl12P40224 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.64■■□□□ 1.05
Cxcl12P40224 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.64■■□□□ 1.05
Cxcl12P40224 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cxcl12P40224 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cxcl12P40224 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cxcl12P40224 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cxcl12P40224 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cxcl12P40224 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cxcl12P40224 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cxcl12P40224 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.63■■□□□ 1.05
Cxcl12P40224 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cxcl12P40224 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.63■■□□□ 1.05
Cxcl12P40224 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cxcl12P40224 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cxcl12P40224 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cxcl12P40224 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms