Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf2P39429 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Traf2P39429 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf2P39429 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf2P39429 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf2P39429 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Traf2P39429 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.91■□□□□ 0.94
Traf2P39429 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Traf2P39429 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Traf2P39429 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.91■□□□□ 0.94
Traf2P39429 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Traf2P39429 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Traf2P39429 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.91■□□□□ 0.94
Traf2P39429 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.9■□□□□ 0.94
Traf2P39429 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.9■□□□□ 0.94
Traf2P39429 Gm10399-202ENSMUST00000202768 748 ntBASIC20.9■□□□□ 0.94
Traf2P39429 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.9■□□□□ 0.94
Traf2P39429 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Traf2P39429 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Traf2P39429 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Traf2P39429 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Traf2P39429 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Traf2P39429 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Traf2P39429 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Traf2P39429 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf2P39429 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Traf2P39429 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Traf2P39429 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.88■□□□□ 0.93
Traf2P39429 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.88■□□□□ 0.93
Traf2P39429 Gm9959-201ENSMUST00000068277 390 ntBASIC20.88■□□□□ 0.93
Traf2P39429 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf2P39429 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf2P39429 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf2P39429 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Traf2P39429 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.87■□□□□ 0.93
Traf2P39429 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Traf2P39429 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.87■□□□□ 0.93
Traf2P39429 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf2P39429 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf2P39429 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Traf2P39429 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Traf2P39429 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.86■□□□□ 0.93
Traf2P39429 Gm40881-201ENSMUST00000223397 166 ntBASIC20.85■□□□□ 0.93
Traf2P39429 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.85■□□□□ 0.93
Traf2P39429 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Traf2P39429 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Traf2P39429 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Traf2P39429 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf2P39429 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.84■□□□□ 0.93
Traf2P39429 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.84■□□□□ 0.93
Traf2P39429 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf2P39429 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf2P39429 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf2P39429 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf2P39429 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf2P39429 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf2P39429 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.83■□□□□ 0.93
Traf2P39429 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf2P39429 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf2P39429 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Traf2P39429 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Traf2P39429 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf2P39429 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf2P39429 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Traf2P39429 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf2P39429 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Traf2P39429 Rps24-207ENSMUST00000224568 714 ntBASIC20.82■□□□□ 0.92
Traf2P39429 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf2P39429 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf2P39429 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf2P39429 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf2P39429 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.82■□□□□ 0.92
Traf2P39429 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Traf2P39429 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Traf2P39429 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf2P39429 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Traf2P39429 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf2P39429 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf2P39429 Etf1-202ENSMUST00000180351 108 ntBASIC20.81■□□□□ 0.92
Traf2P39429 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.81■□□□□ 0.92
Traf2P39429 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf2P39429 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Traf2P39429 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf2P39429 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf2P39429 Gm14117-201ENSMUST00000122417 843 ntBASIC20.8■□□□□ 0.92
Traf2P39429 Gm45102-201ENSMUST00000207427 857 ntBASIC20.8■□□□□ 0.92
Traf2P39429 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Traf2P39429 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Traf2P39429 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Traf2P39429 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Traf2P39429 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.79■□□□□ 0.92
Traf2P39429 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms