Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.05■□□□□ 0.32
Hes1P35428 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hes1P35428 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hes1P35428 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hes1P35428 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hes1P35428 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hes1P35428 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hes1P35428 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.04■□□□□ 0.32
Hes1P35428 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hes1P35428 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hes1P35428 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.04■□□□□ 0.32
Hes1P35428 Gm13238-201ENSMUST00000117655 780 ntBASIC17.04■□□□□ 0.32
Hes1P35428 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.04■□□□□ 0.32
Hes1P35428 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.04■□□□□ 0.32
Hes1P35428 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hes1P35428 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hes1P35428 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hes1P35428 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hes1P35428 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.04■□□□□ 0.32
Hes1P35428 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hes1P35428 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hes1P35428 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hes1P35428 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hes1P35428 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hes1P35428 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hes1P35428 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hes1P35428 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hes1P35428 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hes1P35428 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hes1P35428 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.02■□□□□ 0.32
Hes1P35428 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hes1P35428 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hes1P35428 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.02■□□□□ 0.32
Hes1P35428 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hes1P35428 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.02■□□□□ 0.32
Hes1P35428 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Hes1P35428 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hes1P35428 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hes1P35428 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Hes1P35428 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hes1P35428 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Hes1P35428 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hes1P35428 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hes1P35428 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hes1P35428 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hes1P35428 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hes1P35428 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hes1P35428 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hes1P35428 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17■□□□□ 0.31
Hes1P35428 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17■□□□□ 0.31
Hes1P35428 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hes1P35428 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hes1P35428 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Hes1P35428 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hes1P35428 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17■□□□□ 0.31
Hes1P35428 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17■□□□□ 0.31
Hes1P35428 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hes1P35428 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hes1P35428 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hes1P35428 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Hes1P35428 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hes1P35428 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
Hes1P35428 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hes1P35428 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hes1P35428 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Hes1P35428 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hes1P35428 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Hes1P35428 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hes1P35428 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hes1P35428 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Gm15820-201ENSMUST00000201566 728 ntBASIC16.98■□□□□ 0.31
Hes1P35428 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hes1P35428 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hes1P35428 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.97■□□□□ 0.31
Hes1P35428 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.97■□□□□ 0.31
Hes1P35428 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.97■□□□□ 0.31
Hes1P35428 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.97■□□□□ 0.31
Hes1P35428 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hes1P35428 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.96■□□□□ 0.31
Hes1P35428 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hes1P35428 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hes1P35428 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hes1P35428 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hes1P35428 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
Hes1P35428 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms