Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
BdnfP21237 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BdnfP21237 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.83■□□□□ 0.77
BdnfP21237 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BdnfP21237 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BdnfP21237 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BdnfP21237 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BdnfP21237 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.82■□□□□ 0.76
BdnfP21237 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BdnfP21237 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BdnfP21237 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BdnfP21237 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BdnfP21237 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.8■□□□□ 0.76
BdnfP21237 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.8■□□□□ 0.76
BdnfP21237 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.8■□□□□ 0.76
BdnfP21237 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
BdnfP21237 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
BdnfP21237 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BdnfP21237 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.8■□□□□ 0.76
BdnfP21237 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.79■□□□□ 0.76
BdnfP21237 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BdnfP21237 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BdnfP21237 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BdnfP21237 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
BdnfP21237 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BdnfP21237 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BdnfP21237 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
BdnfP21237 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BdnfP21237 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BdnfP21237 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BdnfP21237 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.77■□□□□ 0.76
BdnfP21237 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BdnfP21237 Gm10420-201ENSMUST00000121713 882 ntBASIC19.77■□□□□ 0.76
BdnfP21237 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BdnfP21237 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
BdnfP21237 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BdnfP21237 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
BdnfP21237 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
BdnfP21237 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
BdnfP21237 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.76■□□□□ 0.75
BdnfP21237 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
BdnfP21237 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BdnfP21237 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BdnfP21237 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BdnfP21237 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BdnfP21237 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BdnfP21237 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BdnfP21237 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.75■□□□□ 0.75
BdnfP21237 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BdnfP21237 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BdnfP21237 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BdnfP21237 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BdnfP21237 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.74■□□□□ 0.75
BdnfP21237 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BdnfP21237 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BdnfP21237 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BdnfP21237 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BdnfP21237 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BdnfP21237 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.73■□□□□ 0.75
BdnfP21237 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BdnfP21237 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BdnfP21237 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BdnfP21237 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BdnfP21237 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BdnfP21237 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BdnfP21237 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BdnfP21237 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BdnfP21237 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
BdnfP21237 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BdnfP21237 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms