Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf9P20334 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf9P20334 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnfrsf9P20334 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf9P20334 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf9P20334 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf9P20334 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tnfrsf9P20334 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tnfrsf9P20334 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf9P20334 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf9P20334 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tnfrsf9P20334 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf9P20334 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.67■□□□□ 0.26
Tnfrsf9P20334 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf9P20334 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Gm10399-202ENSMUST00000202768 748 ntBASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tnfrsf9P20334 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Golgb1-201ENSMUST00000023534 498 ntBASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf9P20334 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf9P20334 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms