Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a2P08122 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.76■□□□□ 0.75
Col4a2P08122 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.76■□□□□ 0.75
Col4a2P08122 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a2P08122 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a2P08122 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a2P08122 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Col4a2P08122 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a2P08122 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
Col4a2P08122 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a2P08122 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Col4a2P08122 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Col4a2P08122 Gm43137-201ENSMUST00000198052 594 ntBASIC19.75■□□□□ 0.75
Col4a2P08122 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a2P08122 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a2P08122 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Col4a2P08122 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.73■□□□□ 0.75
Col4a2P08122 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a2P08122 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a2P08122 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a2P08122 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a2P08122 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col4a2P08122 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a2P08122 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.72■□□□□ 0.75
Col4a2P08122 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.72■□□□□ 0.75
Col4a2P08122 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.72■□□□□ 0.75
Col4a2P08122 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a2P08122 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a2P08122 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.71■□□□□ 0.75
Col4a2P08122 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Col4a2P08122 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a2P08122 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a2P08122 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Col4a2P08122 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Col4a2P08122 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Col4a2P08122 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.74
Col4a2P08122 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a2P08122 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a2P08122 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a2P08122 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a2P08122 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.7■□□□□ 0.74
Col4a2P08122 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Col4a2P08122 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a2P08122 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a2P08122 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a2P08122 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a2P08122 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a2P08122 Gm12251-201ENSMUST00000117893 792 ntBASIC19.69■□□□□ 0.74
Col4a2P08122 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.69■□□□□ 0.74
Col4a2P08122 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a2P08122 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.69■□□□□ 0.74
Col4a2P08122 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.69■□□□□ 0.74
Col4a2P08122 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.69■□□□□ 0.74
Col4a2P08122 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a2P08122 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a2P08122 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col4a2P08122 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Col4a2P08122 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a2P08122 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a2P08122 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a2P08122 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a2P08122 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.68■□□□□ 0.74
Col4a2P08122 Gm9870-201ENSMUST00000063874 645 ntBASIC19.68■□□□□ 0.74
Col4a2P08122 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Col4a2P08122 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a2P08122 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a2P08122 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a2P08122 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a2P08122 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Col4a2P08122 Gm29257-201ENSMUST00000186115 639 ntBASIC19.67■□□□□ 0.74
Col4a2P08122 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.67■□□□□ 0.74
Col4a2P08122 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a2P08122 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.67■□□□□ 0.74
Col4a2P08122 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a2P08122 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.66■□□□□ 0.74
Col4a2P08122 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a2P08122 Gm43173-201ENSMUST00000202246 593 ntBASIC19.66■□□□□ 0.74
Col4a2P08122 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a2P08122 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms