Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.3■□□□□ 0.36
Ercc1P07903 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ercc1P07903 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ercc1P07903 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc1P07903 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc1P07903 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ercc1P07903 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.3■□□□□ 0.36
Ercc1P07903 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc1P07903 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.29■□□□□ 0.36
Ercc1P07903 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc1P07903 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc1P07903 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc1P07903 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Ercc1P07903 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc1P07903 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc1P07903 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.29■□□□□ 0.36
Ercc1P07903 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc1P07903 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ercc1P07903 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc1P07903 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc1P07903 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc1P07903 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc1P07903 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc1P07903 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc1P07903 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc1P07903 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc1P07903 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc1P07903 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ercc1P07903 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc1P07903 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.27■□□□□ 0.35
Ercc1P07903 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ercc1P07903 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ercc1P07903 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ercc1P07903 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.26■□□□□ 0.35
Ercc1P07903 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.26■□□□□ 0.35
Ercc1P07903 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.26■□□□□ 0.35
Ercc1P07903 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ercc1P07903 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc1P07903 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.25■□□□□ 0.35
Ercc1P07903 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc1P07903 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
Ercc1P07903 Gm44428-201ENSMUST00000204474 874 ntBASIC17.25■□□□□ 0.35
Ercc1P07903 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.25■□□□□ 0.35
Ercc1P07903 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc1P07903 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc1P07903 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc1P07903 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.25■□□□□ 0.35
Ercc1P07903 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc1P07903 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc1P07903 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc1P07903 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc1P07903 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.24■□□□□ 0.35
Ercc1P07903 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc1P07903 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc1P07903 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.24■□□□□ 0.35
Ercc1P07903 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc1P07903 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ercc1P07903 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.23■□□□□ 0.35
Ercc1P07903 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.23■□□□□ 0.35
Ercc1P07903 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.23■□□□□ 0.35
Ercc1P07903 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc1P07903 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ercc1P07903 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.22■□□□□ 0.35
Ercc1P07903 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ercc1P07903 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ercc1P07903 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc1P07903 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms