Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PdgfrbP05622 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21■□□□□ 0.95
PdgfrbP05622 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21■□□□□ 0.95
PdgfrbP05622 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PdgfrbP05622 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PdgfrbP05622 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PdgfrbP05622 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PdgfrbP05622 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfrbP05622 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.99■□□□□ 0.95
PdgfrbP05622 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfrbP05622 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfrbP05622 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfrbP05622 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfrbP05622 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.99■□□□□ 0.95
PdgfrbP05622 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfrbP05622 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.98■□□□□ 0.95
PdgfrbP05622 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfrbP05622 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfrbP05622 Gm15820-201ENSMUST00000201566 728 ntBASIC20.98■□□□□ 0.95
PdgfrbP05622 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.98■□□□□ 0.95
PdgfrbP05622 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PdgfrbP05622 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfrbP05622 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfrbP05622 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfrbP05622 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfrbP05622 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfrbP05622 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfrbP05622 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfrbP05622 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.97■□□□□ 0.95
PdgfrbP05622 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PdgfrbP05622 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfrbP05622 Gm5812-201ENSMUST00000061073 957 ntBASIC20.97■□□□□ 0.95
PdgfrbP05622 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfrbP05622 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfrbP05622 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfrbP05622 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfrbP05622 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.96■□□□□ 0.95
PdgfrbP05622 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfrbP05622 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PdgfrbP05622 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfrbP05622 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfrbP05622 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfrbP05622 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfrbP05622 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfrbP05622 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PdgfrbP05622 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.95■□□□□ 0.94
PdgfrbP05622 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PdgfrbP05622 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PdgfrbP05622 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.95■□□□□ 0.94
PdgfrbP05622 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.95■□□□□ 0.94
PdgfrbP05622 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PdgfrbP05622 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PdgfrbP05622 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfrbP05622 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
PdgfrbP05622 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfrbP05622 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.94■□□□□ 0.94
PdgfrbP05622 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PdgfrbP05622 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfrbP05622 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PdgfrbP05622 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfrbP05622 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfrbP05622 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfrbP05622 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
PdgfrbP05622 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PdgfrbP05622 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.93■□□□□ 0.94
PdgfrbP05622 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.93■□□□□ 0.94
PdgfrbP05622 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfrbP05622 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PdgfrbP05622 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PdgfrbP05622 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PdgfrbP05622 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfrbP05622 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfrbP05622 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfrbP05622 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfrbP05622 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfrbP05622 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfrbP05622 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
PdgfrbP05622 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfrbP05622 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.91■□□□□ 0.94
PdgfrbP05622 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfrbP05622 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.91■□□□□ 0.94
PdgfrbP05622 Gm10399-202ENSMUST00000202768 748 ntBASIC20.91■□□□□ 0.94
PdgfrbP05622 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfrbP05622 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfrbP05622 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfrbP05622 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfrbP05622 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfrbP05622 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfrbP05622 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfrbP05622 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfrbP05622 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfrbP05622 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfrbP05622 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PdgfrbP05622 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PdgfrbP05622 Gm15546-201ENSMUST00000122095 826 ntBASIC20.89■□□□□ 0.93
PdgfrbP05622 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.89■□□□□ 0.93
PdgfrbP05622 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PdgfrbP05622 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PdgfrbP05622 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PdgfrbP05622 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms