Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
P04940 Gm10399-202ENSMUST00000202768 748 ntBASIC16.95■□□□□ 0.3
P04940 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04940 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
P04940 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04940 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04940 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.95■□□□□ 0.3
P04940 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.94■□□□□ 0.3
P04940 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
P04940 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04940 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.94■□□□□ 0.3
P04940 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.93■□□□□ 0.3
P04940 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04940 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
P04940 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.93■□□□□ 0.3
P04940 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
P04940 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
P04940 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04940 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
P04940 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
P04940 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P04940 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04940 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04940 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
P04940 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04940 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04940 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
P04940 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04940 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04940 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
P04940 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
P04940 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
P04940 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.91■□□□□ 0.3
P04940 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.91■□□□□ 0.3
P04940 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04940 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04940 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04940 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
P04940 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.9■□□□□ 0.3
P04940 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04940 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04940 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04940 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04940 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
P04940 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04940 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04940 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.89■□□□□ 0.29
P04940 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.89■□□□□ 0.29
P04940 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04940 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
P04940 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04940 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
P04940 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04940 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.88■□□□□ 0.29
P04940 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04940 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04940 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04940 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04940 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04940 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.87■□□□□ 0.29
P04940 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.87■□□□□ 0.29
P04940 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.87■□□□□ 0.29
P04940 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04940 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.87■□□□□ 0.29
P04940 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04940 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
P04940 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04940 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04940 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.86■□□□□ 0.29
P04940 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04940 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.86■□□□□ 0.29
P04940 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.86■□□□□ 0.29
P04940 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.85■□□□□ 0.29
P04940 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04940 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms