Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.38■□□□□ 0.37
Hoxa3P02831 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.38■□□□□ 0.37
Hoxa3P02831 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.38■□□□□ 0.37
Hoxa3P02831 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.37■□□□□ 0.37
Hoxa3P02831 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa3P02831 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hoxa3P02831 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa3P02831 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hoxa3P02831 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxa3P02831 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxa3P02831 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa3P02831 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxa3P02831 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.35■□□□□ 0.37
Hoxa3P02831 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa3P02831 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa3P02831 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa3P02831 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa3P02831 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxa3P02831 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa3P02831 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa3P02831 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa3P02831 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hoxa3P02831 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa3P02831 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa3P02831 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa3P02831 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxa3P02831 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.33■□□□□ 0.37
Hoxa3P02831 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxa3P02831 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa3P02831 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa3P02831 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa3P02831 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxa3P02831 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.33■□□□□ 0.36
Hoxa3P02831 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa3P02831 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.33■□□□□ 0.36
Hoxa3P02831 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa3P02831 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa3P02831 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa3P02831 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hoxa3P02831 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa3P02831 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa3P02831 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.32■□□□□ 0.36
Hoxa3P02831 Gm21956-201ENSMUST00000179946 522 ntBASIC17.32■□□□□ 0.36
Hoxa3P02831 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa3P02831 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa3P02831 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa3P02831 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Hoxa3P02831 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa3P02831 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa3P02831 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hoxa3P02831 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa3P02831 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hoxa3P02831 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.3■□□□□ 0.36
Hoxa3P02831 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hoxa3P02831 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxa3P02831 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa3P02831 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa3P02831 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa3P02831 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa3P02831 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa3P02831 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa3P02831 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa3P02831 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hoxa3P02831 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hoxa3P02831 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa3P02831 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa3P02831 Gm9847-201ENSMUST00000052528 599 ntBASIC17.28■□□□□ 0.36
Hoxa3P02831 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa3P02831 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa3P02831 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hoxa3P02831 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms