Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim3O70209 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pdlim3O70209 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim3O70209 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pdlim3O70209 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim3O70209 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim3O70209 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim3O70209 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Pdlim3O70209 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Pdlim3O70209 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pdlim3O70209 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pdlim3O70209 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim3O70209 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Pdlim3O70209 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pdlim3O70209 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pdlim3O70209 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.78■□□□□ 0.6
Pdlim3O70209 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim3O70209 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pdlim3O70209 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim3O70209 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim3O70209 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim3O70209 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pdlim3O70209 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim3O70209 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.77■□□□□ 0.6
Pdlim3O70209 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim3O70209 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pdlim3O70209 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim3O70209 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim3O70209 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim3O70209 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim3O70209 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
Pdlim3O70209 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim3O70209 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim3O70209 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim3O70209 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim3O70209 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim3O70209 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pdlim3O70209 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim3O70209 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim3O70209 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim3O70209 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim3O70209 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pdlim3O70209 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim3O70209 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.74■□□□□ 0.59
Pdlim3O70209 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim3O70209 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim3O70209 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.74■□□□□ 0.59
Pdlim3O70209 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim3O70209 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Pdlim3O70209 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.73■□□□□ 0.59
Pdlim3O70209 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.73■□□□□ 0.59
Pdlim3O70209 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Pdlim3O70209 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim3O70209 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim3O70209 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim3O70209 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms