Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pde6dO55057 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6dO55057 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6dO55057 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pde6dO55057 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6dO55057 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.35■□□□□ 0.21
Pde6dO55057 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6dO55057 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6dO55057 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pde6dO55057 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pde6dO55057 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Terc-201ENSMUST00000082862 423 ntBASIC16.34■□□□□ 0.21
Pde6dO55057 Gm4799-201ENSMUST00000095396 657 ntBASIC16.34■□□□□ 0.21
Pde6dO55057 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6dO55057 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pde6dO55057 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.33■□□□□ 0.2
Pde6dO55057 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.33■□□□□ 0.2
Pde6dO55057 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.33■□□□□ 0.2
Pde6dO55057 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6dO55057 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pde6dO55057 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6dO55057 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6dO55057 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pde6dO55057 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pde6dO55057 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6dO55057 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6dO55057 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6dO55057 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.32■□□□□ 0.2
Pde6dO55057 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.32■□□□□ 0.2
Pde6dO55057 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6dO55057 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6dO55057 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6dO55057 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6dO55057 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.31■□□□□ 0.2
Pde6dO55057 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6dO55057 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6dO55057 Golph3-202ENSMUST00000226517 2359 ntBASIC16.31■□□□□ 0.2
Pde6dO55057 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6dO55057 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6dO55057 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pde6dO55057 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Pde6dO55057 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.3■□□□□ 0.2
Pde6dO55057 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Pde6dO55057 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.3■□□□□ 0.2
Pde6dO55057 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.3■□□□□ 0.2
Pde6dO55057 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6dO55057 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pde6dO55057 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.29■□□□□ 0.2
Pde6dO55057 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6dO55057 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6dO55057 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6dO55057 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6dO55057 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Pde6dO55057 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6dO55057 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.28■□□□□ 0.2
Pde6dO55057 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.28■□□□□ 0.2
Pde6dO55057 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6dO55057 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6dO55057 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.27■□□□□ 0.2
Pde6dO55057 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6dO55057 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pde6dO55057 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6dO55057 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pde6dO55057 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pde6dO55057 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.27■□□□□ 0.2
Pde6dO55057 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.27■□□□□ 0.2
Pde6dO55057 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6dO55057 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6dO55057 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pde6dO55057 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.27■□□□□ 0.19
Pde6dO55057 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms