Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DffbO54788 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DffbO54788 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.75■□□□□ 0.43
DffbO54788 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DffbO54788 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DffbO54788 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DffbO54788 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DffbO54788 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.74■□□□□ 0.43
DffbO54788 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.74■□□□□ 0.43
DffbO54788 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.74■□□□□ 0.43
DffbO54788 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.74■□□□□ 0.43
DffbO54788 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DffbO54788 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DffbO54788 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DffbO54788 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DffbO54788 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DffbO54788 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DffbO54788 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DffbO54788 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
DffbO54788 Gm11175-201ENSMUST00000116172 543 ntBASIC17.72■□□□□ 0.43
DffbO54788 Gm14523-201ENSMUST00000117260 558 ntBASIC17.72■□□□□ 0.43
DffbO54788 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.72■□□□□ 0.43
DffbO54788 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DffbO54788 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DffbO54788 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DffbO54788 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DffbO54788 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DffbO54788 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.71■□□□□ 0.43
DffbO54788 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DffbO54788 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
DffbO54788 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DffbO54788 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DffbO54788 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DffbO54788 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DffbO54788 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DffbO54788 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DffbO54788 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DffbO54788 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.7■□□□□ 0.42
DffbO54788 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DffbO54788 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DffbO54788 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.69■□□□□ 0.42
DffbO54788 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DffbO54788 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DffbO54788 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DffbO54788 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DffbO54788 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
DffbO54788 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 Gm7332-201ENSMUST00000118351 454 ntBASIC17.68■□□□□ 0.42
DffbO54788 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.68■□□□□ 0.42
DffbO54788 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DffbO54788 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DffbO54788 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DffbO54788 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DffbO54788 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
DffbO54788 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DffbO54788 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DffbO54788 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
DffbO54788 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DffbO54788 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
DffbO54788 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DffbO54788 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DffbO54788 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DffbO54788 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
DffbO54788 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DffbO54788 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.66■□□□□ 0.42
DffbO54788 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DffbO54788 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
DffbO54788 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DffbO54788 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DffbO54788 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DffbO54788 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
DffbO54788 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.65■□□□□ 0.42
DffbO54788 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DffbO54788 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DffbO54788 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
DffbO54788 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DffbO54788 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DffbO54788 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms