Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FxnO35943 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FxnO35943 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FxnO35943 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FxnO35943 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FxnO35943 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FxnO35943 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FxnO35943 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.24■□□□□ 0.67
FxnO35943 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FxnO35943 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.24■□□□□ 0.67
FxnO35943 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
FxnO35943 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FxnO35943 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.23■□□□□ 0.67
FxnO35943 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FxnO35943 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.22■□□□□ 0.67
FxnO35943 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.22■□□□□ 0.67
FxnO35943 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.22■□□□□ 0.67
FxnO35943 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
FxnO35943 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FxnO35943 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FxnO35943 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FxnO35943 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
FxnO35943 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.21■□□□□ 0.67
FxnO35943 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FxnO35943 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FxnO35943 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FxnO35943 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FxnO35943 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FxnO35943 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FxnO35943 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FxnO35943 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FxnO35943 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
FxnO35943 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FxnO35943 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.19■□□□□ 0.66
FxnO35943 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.19■□□□□ 0.66
FxnO35943 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
FxnO35943 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FxnO35943 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.19■□□□□ 0.66
FxnO35943 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.19■□□□□ 0.66
FxnO35943 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.19■□□□□ 0.66
FxnO35943 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FxnO35943 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FxnO35943 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.18■□□□□ 0.66
FxnO35943 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FxnO35943 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FxnO35943 Gm5921-201ENSMUST00000075898 882 ntBASIC19.18■□□□□ 0.66
FxnO35943 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FxnO35943 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FxnO35943 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FxnO35943 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.18■□□□□ 0.66
FxnO35943 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.17■□□□□ 0.66
FxnO35943 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FxnO35943 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FxnO35943 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FxnO35943 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FxnO35943 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FxnO35943 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FxnO35943 Gm43566-201ENSMUST00000196851 808 ntBASIC19.16■□□□□ 0.66
FxnO35943 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FxnO35943 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.16■□□□□ 0.66
FxnO35943 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FxnO35943 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FxnO35943 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FxnO35943 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FxnO35943 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FxnO35943 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FxnO35943 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.15■□□□□ 0.66
FxnO35943 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.15■□□□□ 0.66
FxnO35943 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FxnO35943 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FxnO35943 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FxnO35943 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms