Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1O35604 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1O35604 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.25■□□□□ 0.83
Npc1O35604 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
Npc1O35604 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.25■□□□□ 0.83
Npc1O35604 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1O35604 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.25■□□□□ 0.83
Npc1O35604 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1O35604 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1O35604 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1O35604 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1O35604 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1O35604 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.24■□□□□ 0.83
Npc1O35604 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1O35604 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1O35604 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1O35604 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Npc1O35604 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1O35604 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1O35604 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.23■□□□□ 0.83
Npc1O35604 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.23■□□□□ 0.83
Npc1O35604 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1O35604 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1O35604 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.23■□□□□ 0.83
Npc1O35604 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1O35604 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1O35604 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1O35604 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Npc1O35604 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Npc1O35604 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Npc1O35604 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1O35604 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.22■□□□□ 0.83
Npc1O35604 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1O35604 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.22■□□□□ 0.83
Npc1O35604 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1O35604 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Npc1O35604 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.22■□□□□ 0.83
Npc1O35604 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1O35604 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1O35604 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1O35604 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1O35604 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.21■□□□□ 0.83
Npc1O35604 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Npc1O35604 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1O35604 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Npc1O35604 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1O35604 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
Npc1O35604 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1O35604 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1O35604 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1O35604 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Npc1O35604 Gm22238-201ENSMUST00000175222 88 ntBASIC20.19■□□□□ 0.82
Npc1O35604 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Npc1O35604 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1O35604 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1O35604 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.19■□□□□ 0.82
Npc1O35604 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Npc1O35604 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1O35604 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1O35604 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1O35604 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1O35604 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.18■□□□□ 0.82
Npc1O35604 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1O35604 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1O35604 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npc1O35604 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1O35604 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1O35604 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.17■□□□□ 0.82
Npc1O35604 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1O35604 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Npc1O35604 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1O35604 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1O35604 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Npc1O35604 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Npc1O35604 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npc1O35604 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Npc1O35604 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1O35604 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1O35604 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Npc1O35604 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Npc1O35604 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Npc1O35604 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1O35604 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1O35604 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1O35604 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.16■□□□□ 0.82
Npc1O35604 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Npc1O35604 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Npc1O35604 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1O35604 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Npc1O35604 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Npc1O35604 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1O35604 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1O35604 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1O35604 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1O35604 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npc1O35604 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Npc1O35604 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.14■□□□□ 0.81
Npc1O35604 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.14■□□□□ 0.81
Npc1O35604 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npc1O35604 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms