Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt1O35449 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prrt1O35449 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prrt1O35449 Gm6821-201ENSMUST00000107540 542 ntBASIC17.53■□□□□ 0.4
Prrt1O35449 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prrt1O35449 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.53■□□□□ 0.4
Prrt1O35449 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt1O35449 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt1O35449 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.53■□□□□ 0.4
Prrt1O35449 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt1O35449 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt1O35449 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt1O35449 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.53■□□□□ 0.4
Prrt1O35449 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Prrt1O35449 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prrt1O35449 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prrt1O35449 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Prrt1O35449 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prrt1O35449 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Prrt1O35449 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Prrt1O35449 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.51■□□□□ 0.39
Prrt1O35449 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prrt1O35449 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.5■□□□□ 0.39
Prrt1O35449 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prrt1O35449 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prrt1O35449 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.49■□□□□ 0.39
Prrt1O35449 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.49■□□□□ 0.39
Prrt1O35449 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prrt1O35449 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prrt1O35449 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prrt1O35449 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prrt1O35449 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prrt1O35449 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prrt1O35449 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prrt1O35449 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Prrt1O35449 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.47■□□□□ 0.39
Prrt1O35449 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.47■□□□□ 0.39
Prrt1O35449 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prrt1O35449 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Prrt1O35449 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prrt1O35449 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prrt1O35449 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.46■□□□□ 0.39
Prrt1O35449 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prrt1O35449 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prrt1O35449 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prrt1O35449 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prrt1O35449 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prrt1O35449 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prrt1O35449 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prrt1O35449 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prrt1O35449 Golph3-202ENSMUST00000226517 2359 ntBASIC17.45■□□□□ 0.38
Prrt1O35449 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prrt1O35449 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prrt1O35449 Gm44428-201ENSMUST00000204474 874 ntBASIC17.45■□□□□ 0.38
Prrt1O35449 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prrt1O35449 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Prrt1O35449 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prrt1O35449 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prrt1O35449 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms